Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00208 ATGATCATTTCAGAGAAAAACCGTAGAGAGATCTGCAAGTACCTCTTCCAAGAGGGAGTTTGCTATGCCAAGAAGGACTTCAATCTCGCAAAGCACCCAGAGATTGATGTGCCTAATCTCCAAGTGATTAAGCTGATGCAAAGTTTCAAATCAAGAGAATATGTTAGGGAAACTTTTGCTTGGATGCATTATTACTGGTTCCTCACCAATGATGGAATTGAGTTCCTTAGGACTTACCTCAATCTTCCATCTGAGATTGTTCCAGCCACTTTGAAGAAACAGGCTAAGCCAGCTGGAAGGCCATTCGGTGGTCCACCTGGTGATCGCCCAAGGGGCCCACCTAGATTCGAGGGAGAAAGGAGGTTTGGTGGTGATCGCGATGGATACCGTGGAGGTCCCCGAGGACCTGCTGGTGAATTTGGAGGAGACAAGGGTGGAGCTCCAGCTGACTACAGACCTTCTTTTGGGggtcctggtggtagacctggttttggacgtggtgctggtAGTTTTGGAGCACCAACTAGTTCAAATGCTCCTTAA 543 0.4383 MIISEKNRREICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSFGAPTSSNAP 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00208 180 Pfam Plectin/S10 domain 3 94 IPR005326 -
Car08g00208 180 MobiDBLite consensus disorder prediction 93 180 - -
Car08g00208 180 Gene3D - 1 104 IPR036388 -
Car08g00208 180 PANTHER 40S RIBOSOMAL PROTEIN S10 1 179 IPR037447 -
Car08g00208 180 MobiDBLite consensus disorder prediction 112 128 - -
Car08g00208 180 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00208 Car-Chr8 1656408 1658304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00208 1 180 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 75.556 4.20e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00208 K02947 K09422 gmx:100500445 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00208 08 1656408 1658304 Car08g00208 08 1656408 1658304 ECH
Car08g00208 08 1656408 1658304 Car06g00498 06 5028285 5030713 PCT