Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00199 ATGGGAAACTGCAAAAGCGAACCTATttccaattccgaatcccaacccccacattccaatcccatttcTACACCCCCTCCAGATCTAAACCCCAACCAACCCACCCCAACTGCCACACCTACATCCACCATGGGCCGTGTGTTGGGCCGGCCCATGGAAGATATCCGATCCACATACACTTTCGGCCGCGAATTAGGCCGCGGTCAATTCGGAGTCACATATTTGGTCACTCACAAAATCACCAAAGAACAGTTTGCATGCAAATCCATCGCCACGCGGAAGATCATTAACCGCGGCGACTTAGATGATATCCGCCGTGAAGTTCAGATCATGCATCACCTCACCGGTCACCGTAACATTGTTGAGCTAAAAGGTGCTTACGAGGATCATCATTCTGTTAACCTAATCATGGAACTCTGTGCCGGTGGTGAACTTTTTGATAGGATTATAGCGAAAGGTCATTACTCCGAGCGTGCTGCGGCTGAGTTGTGTGGACAGATGGTGACTGTTGTTCATAATTGTCATAGCATGGGAGTTATGCATAGGGATTTGAAGCCGGAGAATTTCTTGTTTCTTAGTAAGGAAGAGACTTCGCCTCTTAAAGCTACTGATTTCGGCCTCTCCGTTTTTTTTAAGCCCGGAGATGTATTTAATGATCTCGTTGGGAGTGCATATTATGTAGCTCCTGAGGTGCTACATAGAAGGTATGGACCCGAAGCTGATATTTGGAGTGCTGGGGTTATTTTGTATATTCTCCTTTCTGGTGTCCCTCCCTTTTGGGCAGAAAATGAAAAGGGTATCTTTGAGGCTATTCTTCTTGGACATATTGATTTTGAATCGGATCCTTGGCCTTCCATATCAAGTAGCGCTAAAGATCTGATCAAGAAGATGTTGCGTGCTGACCCTAAAGAACGACTTTCGGCTGTTGAAGTCCTCAACCATCCTTGGATGAGAGATGATGGAGCATCCGATAAGCCTCTTGATATTGCTGTTTTAACCCGAATGAAACAATTCAGTGCAATGAACAAGCTAAAGAAAGTAGCTCTGAAGTATATTGCTGAAAATCTTTCTGAAGAAGAGATTATTGGCTTGAAGGAAATGTTCAAATCCATGGACACAGATAACAGCAGAACAATCACTTTTGAAGAGTTGAAAGATGGTCTCTCCAAACTAGGTACTAAGATTTCCGAGTCTGAAGTAAGACAGTTGATGGAAGCGGCTGATGTTGACGGAAATGGAACCATTGATTATATTGAATTTATAACAGCTACCATGCACTTGAATAGAATGGAAAGAGAGAACCATCTGTACAAAGCTTTTGAATATTTTGACAACGACAAAAGCGGGTACATTACAAAGGAAGAGTTGGAATCTGCCCTTAAAAAGTATAACATGGGTGATGAGAAAACAATAAAGGAGATCATTGCCGAAGTTGATTCAGACAATGATGGAAGAATTAACTATGAGGAGTTTGTAGCCATGATGAGGAAAGgggttggagttggagttggacttggCTTGGCTTCTGGACAATCCGTTACAAAATGGGGAGCTAATCCTTTCTCTTCAAACGCCATCACTCCTGAAAAGATTGAACACGAAATGCTTAGACTTATTGTTGATGGCAGAGAAAGTAACGTCACTTTTGATAATTTCCCTTATTATCTCAGTGAGCAGACGCGGGTGTTGCTGACAAGTGCTGCCTATGTCCATTTAAAGCATGCGGAGGTTTCTAGATATACTCGGAATCTTGCTCCTGCAAGCCGGACTATTCTGCTCTCAGGGCCAGCAGAACTTTACCAGCAGGTGCTTGCCAAGGCTTTAGCTCACTACTTTGAGGCCAAATTGCTTCTGTTAGATGTAACTGACTTTTCATTGAAGGTGAGTCAGAAAAATTTGGATACCTCCGATCAATGTAAGAAAGCTAGATGTTTATCAGTTAACTATGAAAATACATTTATTTTCTTTCGAAGTTTATTTATATTTTATTTTAAATTTTTCACTGGTTTATGTAGGGAGACTGAAGGATCTAGTATTCCTCCTATTCGTAGGAATGCATCAGCCTCTGCAAATATTAGCAATCTTGGTTTGCAAAATAATCCTACAAACTCAGCTCCTGGGAAGCACATAAGCAACTGGTCGTTTGATGAAAGGCTTCTTATACAGACTCTTTACAAGGTTCTGGTTTTTGTGTCAAAAACCTACCCCATTGTTCTGTATCTGCGGGATGTCGATAAGTTGTTGTGTAGATCACAAAGGATATCTAAACTCTTCCAGACAATGTTGACGAAATTATCTGGACCAATTTTGATTCTCGGTTCGCTAGTTTTGGATTCTGGTAATGACTGCAAGGAAGTAGATGAGACGCTTACCTCCCTCTTCCCTTACAACATAGAAATCAGACCACCAGAAGATGAATCTCGTCTTGTCAGCTGGAAGTCTCAATTTGAAGAGGATATGAAGAAGATACAGATTCAAGATAACAAGAATCATATCATGGAAGTGCTTGCAGCCAATGATCTCGATTGTCATGACCTGGACTCCGTCTGTGTAGAAGACACAATGCTTCTCAGTAACTATATAGAAGAGATTGTCGTGTCAGCCATTTCATATCACTTAATGAATAACAAAGAGCCTGAATACAGAAATGGGAAACTGGTTGTTCCATGCAATAGTTTGTCCCATGCTCTGGGTATATTCCAGGCCGGAAAATTCAGTGGAAGAGATACATTAAAATTAGAAGCTCAAGCAGTAACATCTGAGAGAGAGGAAGGAGTTGTTGTGAAACCAGAAGGAAAGTCTGGAAGTGCTGCTCCTGGTATAAAGACTGAAGCAGAAATACCAACTTCTGTGGGAAAAACTGATGGTGAAAATTCTGTTCCTGCATCCAAAGCTGAAGTTCCTCCTGATAATGAGTTTGAGAAGCGAATAAGGCCGGAAGTAATACCAGCAAACGAAATTGGGGTAACATTCTCCGATATTGGTGCCTTAGAGGAGACTAAAGAATCACTTCAAGAACTAGTTATGCTTCCCCTTCGAAGACCAGACCTTTTTGAGGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTATTTGGGCCACCTGGCACAGGAAAAACAATGCTGGCAAAGGCCATTGCAAACGAGGCTGGAGCAAGTTTCATTAACGTATCCATGTCTACCATCACCTCTAAATGGTTTGGGGAAGACGAGAAGAATGTCCGTGCTTTATTCACATTGGCAGCCAAGGTCTCCCCAACGATTATATTTGTTGATGAGGTTGATAGTATGCTTGGGCAGAGGACAAGAGTTGGGGAACATGAAGCCATGCGGAAAATAAAGAATGAATTTATGACCAGTTGGGATGGACTTACCTCAAAACCAGAGGATCGCATCCTTGTCCTTGCTGCAACCAATAGGCCCTTTGACCTAGATGAAGCAATTATTAGACGATTTGAAAGGAGAATTATGGTTGGGCTACCGTCTGTGGAGAACAGGGAAAATATAATGAAGACCCTTTTGGCTAAAGAGAAGGTGGACGAGGGACTTGATTTTAAGGAACTCGCAACTATGACAGAAGGATATAGCGGAAGTGATCTAAAGAACTTATGCACAACCGCTGCTTATAGGCCTGTTAGAGAGTTAATTCAGAAAGAGATACAAAAGGATTCGGAGAAAAAGAAGAAAGATGCTGAAGGACAAAATAGCGAAGATGCTCAGGATGGGGAAGAGGAAGTTAAACAGGAAAGAGTTATAACCCTTAGACCTTTGAATATGCAGGACTTCAAAGTGGCAAAGAGTCAGGTCGCCGCAAGCTTCGCGTCTGAGGGGGCTGGTATGAATGAGTTGAAGCAGTGGAATGACTTATATGGGGAAGGCGGTTCAAGGAAGAAAGAACAATTAACTTATTTCCTATGA 3918 0.414 MGNCKSEPISNSESQPPHSNPISTPPPDLNPNQPTPTATPTSTMGRVLGRPMEDIRSTYTFGRELGRGQFGVTYLVTHKITKEQFACKSIATRKIINRGDLDDIRREVQIMHHLTGHRNIVELKGAYEDHHSVNLIMELCAGGELFDRIIAKGHYSERAAAELCGQMVTVVHNCHSMGVMHRDLKPENFLFLSKEETSPLKATDFGLSVFFKPGDVFNDLVGSAYYVAPEVLHRRYGPEADIWSAGVILYILLSGVPPFWAENEKGIFEAILLGHIDFESDPWPSISSSAKDLIKKMLRADPKERLSAVEVLNHPWMRDDGASDKPLDIAVLTRMKQFSAMNKLKKVALKYIAENLSEEEIIGLKEMFKSMDTDNSRTITFEELKDGLSKLGTKISESEVRQLMEAADVDGNGTIDYIEFITATMHLNRMERENHLYKAFEYFDNDKSGYITKEELESALKKYNMGDEKTIKEIIAEVDSDNDGRINYEEFVAMMRKGVGVGVGLGLASGQSVTKWGANPFSSNAITPEKIEHEMLRLIVDGRESNVTFDNFPYYLSEQTRVLLTSAAYVHLKHAEVSRYTRNLAPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDVTDFSLKVSQKNLDTSDQCKKARCLSVNYENTFIFFRSLFIFYFKFFTGLCRETEGSSIPPIRRNASASANISNLGLQNNPTNSAPGKHISNWSFDERLLIQTLYKVLVFVSKTYPIVLYLRDVDKLLCRSQRISKLFQTMLTKLSGPILILGSLVLDSGNDCKEVDETLTSLFPYNIEIRPPEDESRLVSWKSQFEEDMKKIQIQDNKNHIMEVLAANDLDCHDLDSVCVEDTMLLSNYIEEIVVSAISYHLMNNKEPEYRNGKLVVPCNSLSHALGIFQAGKFSGRDTLKLEAQAVTSEREEGVVVKPEGKSGSAAPGIKTEAEIPTSVGKTDGENSVPASKAEVPPDNEFEKRIRPEVIPANEIGVTFSDIGALEETKESLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTSWDGLTSKPEDRILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENRENIMKTLLAKEKVDEGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQKEIQKDSEKKKKDAEGQNSEDAQDGEEEVKQERVITLRPLNMQDFKVAKSQVAASFASEGAGMNELKQWNDLYGEGGSRKKEQLTYFL 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00199 1305 Gene3D Phosphorylase Kinase; domain 1 61 144 - -
Car08g00199 1305 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Car08g00199 1305 ProSitePatterns EF-hand calcium-binding domain. 372 384 IPR018247 -
Car08g00199 1305 ProSitePatterns AAA-protein family signature. 1132 1151 IPR003960 GO:0005524|GO:0016887
Car08g00199 1305 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 497 1305 - -
Car08g00199 1305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Car08g00199 1305 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
Car08g00199 1305 ProSiteProfiles Protein kinase domain profile. 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00199 1305 Pfam ATPase family associated with various cellular activities (AAA) 1029 1159 IPR003959 GO:0005524|GO:0016887
Car08g00199 1305 Pfam AAA+ lid domain 1183 1224 IPR041569 -
Car08g00199 1305 ProSiteProfiles EF-hand calcium-binding domain profile. 359 394 IPR002048 GO:0005509
Car08g00199 1305 SMART serkin_6 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00199 1305 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 497 1305 - -
Car08g00199 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 573 835 IPR027417 -
Car08g00199 1305 CDD AAA 1027 1160 - -
Car08g00199 1305 CDD STKc_CAMK 59 316 - -
Car08g00199 1305 Gene3D - 1161 1241 - -
Car08g00199 1305 MobiDBLite consensus disorder prediction 19 34 - -
Car08g00199 1305 Gene3D - 988 1160 IPR027417 -
Car08g00199 1305 ProSiteProfiles EF-hand calcium-binding domain profile. 431 466 IPR002048 GO:0005509
Car08g00199 1305 Gene3D Transferase(Phosphotransferase) domain 1 145 324 - -
Car08g00199 1305 MobiDBLite consensus disorder prediction 924 971 - -
Car08g00199 1305 Pfam Protein kinase domain 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00199 1305 SUPERFAMILY Protein kinase-like (PK-like) 56 329 IPR011009 -
Car08g00199 1305 MobiDBLite consensus disorder prediction 1 18 - -
Car08g00199 1305 MobiDBLite consensus disorder prediction 1 51 - -
Car08g00199 1305 MobiDBLite consensus disorder prediction 1220 1248 - -
Car08g00199 1305 SMART efh_1 399 427 IPR002048 GO:0005509
Car08g00199 1305 SMART efh_1 470 498 IPR002048 GO:0005509
Car08g00199 1305 SMART efh_1 435 463 IPR002048 GO:0005509
Car08g00199 1305 SMART efh_1 363 391 IPR002048 GO:0005509
Car08g00199 1305 ProSitePatterns EF-hand calcium-binding domain. 444 456 IPR018247 -
Car08g00199 1305 ProSiteProfiles EF-hand calcium-binding domain profile. 467 501 IPR002048 GO:0005509
Car08g00199 1305 ProSitePatterns EF-hand calcium-binding domain. 408 420 IPR018247 -
Car08g00199 1305 SMART AAA_5 1025 1162 IPR003593 -
Car08g00199 1305 Gene3D - 325 498 - -
Car08g00199 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 989 1226 IPR027417 -
Car08g00199 1305 ProSiteProfiles EF-hand calcium-binding domain profile. 395 430 IPR002048 GO:0005509
Car08g00199 1305 SUPERFAMILY EF-hand 355 496 IPR011992 -
Car08g00199 1305 Pfam EF-hand domain pair 434 496 IPR002048 GO:0005509
Car08g00199 1305 Pfam EF-hand domain pair 364 424 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00199 Car-Chr8 1558348 1572609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00199 45 498 EF-hand Containing Proteins AT4G23650 79.341 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car08g00199 Pkinase 3.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00199 - - gmx:100783137 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00199 08 1558348 1572609 Car08g00199 08 1558348 1572609 ECH
Car08g00199 08 1558348 1572609 Car06g00478 06 4811999 4816816 PCT