Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00197 ATGACTTCCAATACTACATCTGGAAATGTTTGTCCGCCGCCGATGAAACCCACATCTAATGGTGCATTTCAGGGAGATAACCCTCTTGATTATGCACTTCCCTTGGCTATTTTACAGATATGCCTTGTTCTTGTAGTCACAAGGGGACTGGCCTATCTTTTTAGACCTTTAAGGCAACCACGAGTTATTGCAGAGATTGTTGGAGGAATACTACTTGGGCCATCTGCGCTTGGACGGAATAAAAGCTATCTCAATGCAGTTTTCCCACCCAAGAGTCTTACAGTATTAGATACTCTAGCAAACCTTGGCCTTATCTTCTTTCTATTTTTAGCCGGCGTAGAGTTAGATCCGAAATCTCTGCGGAAAACTGGAGGCCGAGTCCTTGCCATTGCCACGGCTGGAATAAGCTTACCGTTTGCACTAGGCATTGGTTCATCGTTTGTTCTGAAAGCAACGATTGCCAAAGATGTAAATACTTCTGCATTTGTTGTATATATGGGTGTTGCTCTGTCTATAACCGCATTTCCTGTATTAGCTCGTATTTTGGCTGAGTTAAAACTTCTAACGACCAGTGTTGGAAGAATGGCTATGTCGGCTGCAGCAGTTAATGATGTAGCAGCCTGGATTCTTCTTGCTCTGGCTGTCGCCTTATCAGGCAATAGCCAATCTCCACTTGTGTCACTGTGGGTCTTCTTAGGTGGGTGTGGTTTTGTCGTTTGTTCGATCCTCATTGTCCTTCCTATTTTCAAATGGATGGCTCAGAAATGCCATGAAGGCGAGCCGGTCGAAGAGTTATACATATGTGCTACATTAGCTGCTGTTCTGGCTGCTGGATTTGTCACAGATGCTATTGGAATTCATGCCATGTTTGGCGCATTTGTTTTCGGAATTTTGGTTCCAAAAGACGGACCATTTGCAGGTGCTCTTGTAGAGAAAATAGAAGATCTTGTGTCTGGTCTATTGCTCCCACTCTATTTTGTGTCAAGTGGATTGAAGACCAACATTGCCACCATTCAAGGGCTGCAATCGTGGGGCCTTGTAATTTTTGTTACATTTACTGCGTGTTTTGGGAAGATTGTCGGGACTATTGTTGCATGTCTTTTATGTAAAGTATCTTTTAATGAGTCTTTAGTGTTGGGATTCTTGATGAATAGTAAAGGCTTGGTTGAATTAATTGTCCTCAACATCGGTAAAGAAAGAAAGGTTTTGAATGATCAGACTTTTGCCATTATGGTTCTCATGGCTCTCTTTACTACCTTCATGACTACTCCTCTTGTGATGGCTGTGTATAAGAGAAAGGCAAGAATATCTGATTACAAGTACAGAACAATTGAAAGGAAAAATGCAAACAGCCAACTTAGGATTCTTGTCTGCTTCCATGGTGCAAGGAATATTCCATCGGTGATAAATCTGATCGAAATTTCAAGAGGAATCCAGAAGCGCGACGCACTCTGTGTGTATGCAATGCACCTTAAAGAATTTTCCGAGAGGTCCTCATCGATGCTAATGGTACAAAAGGTAAGAAAAAATGGGTTGCCGTTTTGGAATAAAGGTCCCCGTGCAGATTCTGACCATGTTATTGTAGCATTTGAGGCTTACCAGCAACTAAGCCAAGTGTCTGTCCGGCCAATGATAGCAATCTCATCAATGGCTAACATTCACGAAGACATTTGTTCAACCGCAGAGAGAAAGAGCGCCGCAGTCATTATTCTTCCGTTTCATAAGCAACAAAGATTAGATGGTTCACTAGACATTACAAGAAGCGATTTTCGATTGGTTAACAAAAGGGTACTCGATAATGCACCGTGCTCAGTTGGAATTCTTGTTGATCGTGGGCTTGGTGGTACATGCCATGTGTCTGCAAGTAATGTTTCCTATTCCATTGTTGTGCTATTCTTTGGCGGTGGTGATGACCGAGAAGCCCTTGCTTATGGAGCTCGTATGGCCGAGCACCCTGGAATAAGATTAGTGGTTGTTCGATTCTTAGTGGAACCTAATATTGTAGGAGAGATTACAAGAGTTGACATTGGAGACTCTTCTAGCAGTAAACCAATCTCAGAGGATGATGAGTTCCTTGCGGAATTTAGGCTGAAAACAACCAATGATGACTCTGTTATCTATGGGGAGAAAATTGTAAAAGATGCTGCAGAAACCGTTGCTACTATCCGTGAGTTTAATTGCTGCAACCTATTTGTTGTGGGTCTAAGACCAACCGGTGAACTTACCTGTGCTCTGGAAAGAAACGATTCTTCAGAGCTAGGACCTGTTGGTGGTTTGTTGGCATCACAAGATTACTCCACAACAGCATCAGTTTTGGTGATGCAACAGTATCGCAATGATATGCCAATAAATTTAGTCCAAGAAATGGAGTAA 2373 0.4248 MTSNTTSGNVCPPPMKPTSNGAFQGDNPLDYALPLAILQICLVLVVTRGLAYLFRPLRQPRVIAEIVGGILLGPSALGRNKSYLNAVFPPKSLTVLDTLANLGLIFFLFLAGVELDPKSLRKTGGRVLAIATAGISLPFALGIGSSFVLKATIAKDVNTSAFVVYMGVALSITAFPVLARILAELKLLTTSVGRMAMSAAAVNDVAAWILLALAVALSGNSQSPLVSLWVFLGGCGFVVCSILIVLPIFKWMAQKCHEGEPVEELYICATLAAVLAAGFVTDAIGIHAMFGAFVFGILVPKDGPFAGALVEKIEDLVSGLLLPLYFVSSGLKTNIATIQGLQSWGLVIFVTFTACFGKIVGTIVACLLCKVSFNESLVLGFLMNSKGLVELIVLNIGKERKVLNDQTFAIMVLMALFTTFMTTPLVMAVYKRKARISDYKYRTIERKNANSQLRILVCFHGARNIPSVINLIEISRGIQKRDALCVYAMHLKEFSERSSSMLMVQKVRKNGLPFWNKGPRADSDHVIVAFEAYQQLSQVSVRPMIAISSMANIHEDICSTAERKSAAVIILPFHKQQRLDGSLDITRSDFRLVNKRVLDNAPCSVGILVDRGLGGTCHVSASNVSYSIVVLFFGGGDDREALAYGARMAEHPGIRLVVVRFLVEPNIVGEITRVDIGDSSSSKPISEDDEFLAEFRLKTTNDDSVIYGEKIVKDAAETVATIREFNCCNLFVVGLRPTGELTCALERNDSSELGPVGGLLASQDYSTTASVLVMQQYRNDMPINLVQEME 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00197 790 Pfam Sodium/hydrogen exchanger family 42 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car08g00197 790 PANTHER CATION/H + ANTIPORTER 7 789 - -
Car08g00197 790 Gene3D - 35 438 IPR038770 -
Car08g00197 790 PANTHER CATION/H(+) ANTIPORTER 18 7 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00197 Car-Chr8 1546185 1550477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00197 5 777 Antiporter Super Family AT5G41610 68.582 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00197 - - gmx:100810155 1250.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00197 08 1546185 1550477 Car08g00197 08 1546185 1550477 ECH