Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00189 ATGGAACAGCTCCGGCATATTGGTGAGGTTCTTGGAAGTCTAAAAGCGCTTATGGTTTTGCGCGACGAAATTCAAATCAATCAGCGACAATGTTGTTTGATCCTCGACATATTCACTTTAGCGTTCGACACAATCGCAGATGAAATAAGGCAGAATCTAAAGCTTGAAGAAAGAACAACAAAATGGAAACCTCTTGAGTTTCCCCTCAGAGAACTTTGCAGGGTTTTCAAAGAAGGTGAACTATACATCAAACATTGTTTGGATTCAAAAGATTGGTTGGGGAAAGCACTCACACTTTCTCAGAACAGAGAATGCATTGAGTTTCACATTCATAACTTGTTATGTTATTTCCCTGCGGTTATAGAAGCGATTGAGAATGCTGGTGAGGTGTCAGGCTTGGATCAAGATGAGTATGTGAAGAAGAAAATTATGCTTGCAAGAAAATATGATGTTGAGTGGAATGATCCAAAACTTTTTCAATGGAGATATGGGAAACAGTATTTGGTTCCAAGAGAGATTTGCATACAATTGGAGAATGCTTGGAGGGAAGATAGATGGAGACTCATAGAAGCACTCAAGGAGAAAAAAGGTTCTTCAAAACTCACTTGTTCAAAGAATGAGCAACATCTTGCTGATATGTTGTTGAAGAAAATGATGCATGGTTCAGAAAAAACCaatagtaataataacaacaataataataaGGATTTGTTGCCAATTTCTTTGTTGTTAGGATCCAAGGATTACCAAGTGAGGAGAAGATTGGGAAGAGGAAAAGATTTTAAGGAAATCCAATGGTTAGGACAAAGTTTTGCTTTAAGACATTTTCATGGTGAGAGAGAAGCACATGAGGAGGAGATTTCAAATTTGCTATCACTTTATCACCCTAACATATTGGAATATCTATGTGGTTTTTATGATGAAGAGAAGAAAGAGTTTTCTCTTGTGATGGAGTTAATGAACAAGGATTTATGGACATACATGAAAGAGAATTGTGGTCCAAGGAGACAGATTTTGTTCTCTATACCTGTTGTGGTGGATCTCATGCTTCAAATGGCCAGAGGCATTGAGTTTCTTCACTCCAAAAAGATTTATCATGGTGATCTTAATCCTTGTAATATCCTATTAAGAGCTAGAAACTCTGAAGGTTATTTTCTAGCAAAAGTTGTTGGATTTGGCTTGTCTTCTGTTAAAAGTAGTGACAATAACAATATTAATAAAACTTCACCAACAAATAACCCTACTAGTGAAGAGATTAACCCTTCAATTTGGTATGCACCTGAGGTTTTAACTGAGATAGAACAAAAGGGAAATGCCAAAGCTTCTACTTCTTGTAAGTACTCGGAGAAAGCCGATGCATATAGCTTTGGAATGATATGTTTTGAACTGTTAACTGGTAAAGTTCCTTTTGAAGATAATCATCTTCAAGGTGATAGAACTAATCAAAATCTCAAAGCAGGAGAGAGACCTTTGTTTCCGTACCATTCGCCAAAATATCTTGTGAGTTTGATAAAAAAGTGTTGGCAAACCGATCCATCGCAGCGTCCTACTTTCTCGTCTATTTGTAGAATCTTGCGTTACACGAAAAAGTTCCTTTCGATGAACAATGAGTATGCTATGATCAATCCTGAACTCAATCAGCTTGAACTACAGAACCCTCCTGTTGATTGTTGTGACATTGAAGGATTTTTCCTTAAGAATTTTCCAATGGAGAGGATATGTAATATGTCTTCTGTTTCACAAATACCATATGAAATGTTTGCTTATAAAGTTGTTGAGAAAGGGAAGATTAATCAGAGTCAGAATAATAATAATGCTAAAGATAAGCGTTGTGAGTGTGAGCAACCAAAGGATGAGACCTTGATACGTAGGGATGAAAATGACCAAAGTACAGATTGTGGAGATGATAATGCATCAATTTGTGGTGACACATTGTCTACTTTTTCTGATGCACCATCTGGGAAGAGTGTTTCAACGAAGAAACCAATGCAAATGAAGGCAAAGAAAGACCAAGGAATACCAAAATTAAGAGTAACAAGATCATTACCACCATGTTCATCTGGTCGCATTTCAAGGACAAATAAGGCGAATCAATCTAGCCCTCTAAGCCCTGTTAAAAGAAGACCTTCCAGTGTCTTAGAATCTGAAAGCAATTCCAATATTATCAAAGGGAATCAATCACCATTAGTGTTAACTTCAAGCTCAATTAGAAGAAACAAATATGAAGGAGGACATGTCATAGATGCAAAGCCTTCTAGTATAAAGCTGAAAACAAGAGACCAATCACCATTAACTAGAAACGCCCTTGTCAAAGATTATATTGGTAGTTTAAAGACAAAAAAATCACAACTCACGTTGAATCATTCTTTGAGTCCAACAAGAATGAGACGTGTCAATAGTAACACTAGTGTGAGGATGCAAAAGGGGTTTATATCAACACCTCCAATGAGTCCTTCAAGGTCATGCACAAACAAAAAAAGTTGTCATGTATCAGATATGGATAATAGTGGTTTGAAGATACGACGTAGATTGTCACCATTGGCATTGAGTCCTTTAAGTTCATATATGAGAAGTAAAACATGTGAAAATCTTTCTGATTTAGAGAGCAATCCTAATAAGACAAAAAGAGGAAGCTTGTCACCATTTGCATTGACCCCTTTGAGCCCATATGTGACAATGGGTGGTCATATCTCGGATTAA 2700 0.3659 MEQLRHIGEVLGSLKALMVLRDEIQINQRQCCLILDIFTLAFDTIADEIRQNLKLEERTTKWKPLEFPLRELCRVFKEGELYIKHCLDSKDWLGKALTLSQNRECIEFHIHNLLCYFPAVIEAIENAGEVSGLDQDEYVKKKIMLARKYDVEWNDPKLFQWRYGKQYLVPREICIQLENAWREDRWRLIEALKEKKGSSKLTCSKNEQHLADMLLKKMMHGSEKTNSNNNNNNNKDLLPISLLLGSKDYQVRRRLGRGKDFKEIQWLGQSFALRHFHGEREAHEEEISNLLSLYHPNILEYLCGFYDEEKKEFSLVMELMNKDLWTYMKENCGPRRQILFSIPVVVDLMLQMARGIEFLHSKKIYHGDLNPCNILLRARNSEGYFLAKVVGFGLSSVKSSDNNNINKTSPTNNPTSEEINPSIWYAPEVLTEIEQKGNAKASTSCKYSEKADAYSFGMICFELLTGKVPFEDNHLQGDRTNQNLKAGERPLFPYHSPKYLVSLIKKCWQTDPSQRPTFSSICRILRYTKKFLSMNNEYAMINPELNQLELQNPPVDCCDIEGFFLKNFPMERICNMSSVSQIPYEMFAYKVVEKGKINQSQNNNNAKDKRCECEQPKDETLIRRDENDQSTDCGDDNASICGDTLSTFSDAPSGKSVSTKKPMQMKAKKDQGIPKLRVTRSLPPCSSGRISRTNKANQSSPLSPVKRRPSSVLESESNSNIIKGNQSPLVLTSSSIRRNKYEGGHVIDAKPSSIKLKTRDQSPLTRNALVKDYIGSLKTKKSQLTLNHSLSPTRMRRVNSNTSVRMQKGFISTPPMSPSRSCTNKKSCHVSDMDNSGLKIRRRLSPLALSPLSSYMRSKTCENLSDLESNPNKTKRGSLSPFALTPLSPYVTMGGHISD 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00189 899 Pfam Protein tyrosine and serine/threonine kinase 279 524 IPR001245 GO:0004672|GO:0006468
Car08g00189 899 SUPERFAMILY Protein kinase-like (PK-like) 247 535 IPR011009 -
Car08g00189 899 PANTHER SERINE-THREONINE PROTEIN KINASE 1 724 - -
Car08g00189 899 Gene3D Transferase(Phosphotransferase) domain 1 225 551 - -
Car08g00189 899 MobiDBLite consensus disorder prediction 644 660 - -
Car08g00189 899 MobiDBLite consensus disorder prediction 684 719 - -
Car08g00189 899 MobiDBLite consensus disorder prediction 808 831 - -
Car08g00189 899 ProSiteProfiles Protein kinase domain profile. 249 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00189 899 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 724 - -
Car08g00189 899 MobiDBLite consensus disorder prediction 808 833 - -
Car08g00189 899 MobiDBLite consensus disorder prediction 644 719 - -
Car08g00189 899 Pfam Protein of unknown function (DUF1221) 21 246 IPR010632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00189 Car-Chr8 1480247 1484163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00189 285 542 MAP Kinase Kinase Kinase AT1G14000 31.818 8.38e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Car08g00189 PK_Tyr_Ser-Thr 1.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00189 - - cam:101509043 1792.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00189 08 1480247 1484163 Car08g00189 08 1480247 1484163 ECH