Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00184 ATGGAACAACATTCCCAAAGTAAGGCGAAGAACAACTCCTCCAACACAAATATAAACTCTCAAGAGGTGAGCAGCATTGAATGGGAATTCATAGAGATGAGCGAACAAGAAGAGGATCTCATTCGTAGGATGTACTGCTTAGTTGGAGATAGGTGGAATTTGATAGCAGGTCGTATTCCAGGTCGTAAAGCAGAAGAAATAGAGAGATTCTGGATTATGAGACATACTGATGCTTTTTCTGCCAAAAGAAGTGAACGAAAATCAAATTAA 270 0.3926 MEQHSQSKAKNNSSNTNINSQEVSSIEWEFIEMSEQEEDLIRRMYCLVGDRWNLIAGRIPGRKAEEIERFWIMRHTDAFSAKRSERKSN 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00184 89 CDD SANT 32 71 IPR001005 -
Car08g00184 89 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 5 86 - -
Car08g00184 89 SMART sant 29 77 IPR001005 -
Car08g00184 89 MobiDBLite consensus disorder prediction 1 20 - -
Car08g00184 89 Gene3D - 33 89 - -
Car08g00184 89 SUPERFAMILY Homeodomain-like 34 72 IPR009057 -
Car08g00184 89 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC3 5 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00184 Car-Chr8 1438633 1439580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00184 33 71 MYB Transcription Factor Family AT5G52600 58.974 6.84e-12 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car08g00184 Myb_DNA-binding 2.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00184 K09422 - cpap:110825591 119.012