Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00181 ATGTCATGTGTAACTTCAGATTCTATTAGTAGGAGGAAATTTTCAATGGATAATAGTGTTGTCACTGATAATATAAAATCTAAACAAATTGAGCGATGTTACGACGATTATAGAAAAAAGAGAAAGCGTTCTTGTAAGGCGGTGGTGGTTCCGACGATGGAATCATCAACAACCGGAGACACCGCCACGACATCACACGGTTTTATATCGGTGATTGGGCGGCGGAGGGTGATGGAGGATGCTATTAAAGTGATTCTCGATTTCGTGACGGCGGAAAAGCAACCGTGTGGATACGATTTCTTTGCGGTTTACGACGGTCACGGTGGGATGACGGTGGCGAATGCTTGTCGTGATAGGATGCATTTGTTGTTGGCGGAGGAAGTTAAGGAGGAGTGTAGAGTTAATCATGGATTGGATTGGTGTAAGGCTATGTGTTCTTCTTTTATGAAAATGGATCGTGAAACTGGAATCGGTGATGATGGAGATGGAAATACTGTTGGTTCTACGGCGGCGGTTGTGGTGGTTGGTAAGGAGGAGATTGTTGTCGCCAATTGTGGTGATTCTAGAGCCGTCTTGTGTCGTGACGGCGTTGCTGTGCCACTTTCACGTGATCATAAGCCAGATGTTCCGGATGAAAGAGAGAGGATTGAAGCAGCGGGTGGAAGAGTGATTGATTGGAATGGAAGTAGAATATTAGGAGTGCTTGCAACATCGAGATCCATAGGGGATCATTGTATGAAGCCATTTGTGATATCACAACCAGAGATAAATGTGTGCGGAAGAACAAAATCAGATGAGTTTGTAGTGGTAGCAAGTGATGGTCTTTGGGATGTAGTATCAAACAATTTTGTATGTGAAGTTGTGAGAAGTTGTCTCCAAGGTCACATCAAGAGAAATATGAAAGAAGATACAATTCAAAGTTATGCTGCTGAGGCTGCAGCACTTTTAGCTGAATTGGCTATGGCTAAAGGAAGTAAAGATAACATTAGTGTTATAGTTATTCAGCTCAACAATACTATCACTTGA 1026 0.4269 MSCVTSDSISRRKFSMDNSVVTDNIKSKQIERCYDDYRKKRKRSCKAVVVPTMESSTTGDTATTSHGFISVIGRRRVMEDAIKVILDFVTAEKQPCGYDFFAVYDGHGGMTVANACRDRMHLLLAEEVKEECRVNHGLDWCKAMCSSFMKMDRETGIGDDGDGNTVGSTAAVVVVGKEEIVVANCGDSRAVLCRDGVAVPLSRDHKPDVPDERERIEAAGGRVIDWNGSRILGVLATSRSIGDHCMKPFVISQPEINVCGRTKSDEFVVVASDGLWDVVSNNFVCEVVRSCLQGHIKRNMKEDTIQSYAAEAAALLAELAMAKGSKDNISVIVIQLNNTIT 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00181 341 SMART PP2C_4 55 334 IPR001932 -
Car08g00181 341 SUPERFAMILY PP2C-like 62 338 IPR036457 -
Car08g00181 341 PANTHER ALPHABET, ISOFORM E-RELATED 29 338 - -
Car08g00181 341 Gene3D - 60 339 IPR036457 -
Car08g00181 341 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 29 338 - -
Car08g00181 341 Pfam Protein phosphatase 2C 66 329 IPR001932 -
Car08g00181 341 ProSitePatterns PPM-type phosphatase domain signature. 100 108 IPR000222 GO:0043169
Car08g00181 341 ProSiteProfiles PPM-type phosphatase domain profile. 65 336 IPR001932 -
Car08g00181 341 CDD PP2Cc 65 336 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00181 Car-Chr8 1412176 1413872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00181 60 336 PP2C-type Phosphatase Gene Family AT2G29380 47.260 2.30e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00181 K14497 - gmx:100813248 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00181 08 1412176 1413872 Car08g00181 08 1412176 1413872 ECH