Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00170 ATGGTTGCCGCCGCTATCTCAACCGTTACCGATGTCAATCTTTACACCAGATTTGATTCCTCTTCTTCTATCCCATTCACCTTCAACTCTCGCTTCCCACTCTCTCTTCATTTTCGTAACTCTGAGTCCAAATGCTTTTCTTCTATCAGATGCCAATCGATTAATGGCGATAAGAGGAAATCAAGTAGTAGAAATGTGTTCGACAACGCGAGCAACCTCCTAACGAACTTGTTAAGTGGTGGAAGTTTAGGGTCTATGCCTATAGCTGAAGGTGCTGTCACAGATCTGTTTGAACGACCTCTCTTTTTCTCACTATATGATTGGTTCTTAGAGCATGGCTCTGTGTATAAACTTGCGTTTGGACCAAAAGCATTTGTTGTTGTATCAGACCCCATTGTTGCAAGACATATTCTGAGAGAAAATGCCTTTTCTTACGACAAGGGAGTACTTGCTGATATCCTAGAACCAATTATGGGAAAAGGACTCATACCTGCAGACCTTGATACATGGAAGCAGAGGAGAAGAGTGATTGCTCCGGGTTTCCATACCTCATACTTGGAAGCTATGGTAAAACTATTCACAGCCTGTTCAGAAAGAACAGTATCAAAGTTCAATAAGCTTCTTGAAGGAGAGGGTTATGATGGACAGAAATCAATTCAATTGGACCTTGAGGCAGAATTTTCAAGTTTGGCTCTTGATATCATTGGGCTAGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAACGAATCTCCAGTTATTAAGGCTGTCTATGGTACCCTTTTTGAAGCCGAACATAGATCCACTTTCTATATTCCATATTGGAAATTTCCATTAGCAAGGTGGATAGTACCCAGGCAAAGGAAGTTTCAGGATGACCTTAAGGTCATTAATACTTGTCTCGATGGACTTATCAGAAATGCAAAAGACAGCAGGCAGGAAACAGATGTTGAGAAACTGCAGCAAAGGGATTACTCAAATTTGAAGGATGCAAGTCTTCTGCGTTTCCTAGTTGATATGCGGGGAGTTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAGACAACGGCTGCAGTTCTTACCTGGGCAGTTTTCCTGCTAGCTCAAAATCCCGACAAAATGAAGAAGGCTCAAGCAGAGGTAGATTCGGTGCTGGGTACGGGAAAGCCAACTTTTGAATTACTTAAAAAGTTGCAGTACATCAGGTTAATTGTTGTTGAGTCTCTTCGGTTATATCCACAACCACCTTTGCTGATTAGACGTTCACTCAAATCTGATGTTTTGCCAGGAGGGCATAAAGGTGACAAAGATGTACAAAACAAGAATGAAGAAATTGAAGGGTGGGCTGGTTTTGACCCATCTCGAAGTCCTGGAGCCTTGTATCCGAATGAGATTATATCGGATTTTGCATTCTTGCCTTTTGGTGGCGGACCACGAAAATGTGTTGGGGACCAATTTGCTCTCATGGAGTCCACTGTAGCACTGACTATGCTGCTGCAGAATTTCGACGTGGAATTGAAGGGAACCCCCGAGTCGGTTGAACTAGTTACCGGTGCAACTATCCATACCAAAAATGGATTGTGGTGTAACTTGAGGAAGAGATCTTGA 1635 0.4251 MVAAAISTVTDVNLYTRFDSSSSIPFTFNSRFPLSLHFRNSESKCFSSIRCQSINGDKRKSSSRNVFDNASNLLTNLLSGGSLGSMPIAEGAVTDLFERPLFFSLYDWFLEHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHTSYLEAMVKLFTACSERTVSKFNKLLEGEGYDGQKSIQLDLEAEFSSLALDIIGLGVFNYDFGSVTNESPVIKAVYGTLFEAEHRSTFYIPYWKFPLARWIVPRQRKFQDDLKVINTCLDGLIRNAKDSRQETDVEKLQQRDYSNLKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPDKMKKAQAEVDSVLGTGKPTFELLKKLQYIRLIVVESLRLYPQPPLLIRRSLKSDVLPGGHKGDKDVQNKNEEIEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGATIHTKNGLWCNLRKRS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00170 544 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 81 543 - -
Car08g00170 544 SUPERFAMILY Cytochrome P450 99 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 PANTHER CYTOCHROME P450 FAMILY 4 81 543 - -
Car08g00170 544 PRINTS P450 superfamily signature 490 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 PRINTS P450 superfamily signature 360 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 PRINTS P450 superfamily signature 481 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 PRINTS E-class P450 group I signature 109 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 PRINTS E-class P450 group I signature 349 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 PRINTS E-class P450 group I signature 369 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 PRINTS E-class P450 group I signature 480 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 PRINTS E-class P450 group I signature 490 513 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 Gene3D Cytochrome P450 85 544 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 Pfam Cytochrome P450 109 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 Pfam Cytochrome P450 473 537 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00170 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 483 492 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00170 Car-Chr8 1321568 1329306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00170 32 544 Cytochrome P450 AT4G15110 72.364 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00170 K24543 - gmx:606504 907.131