Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00147 ATGGAAGAATCAAATAGCATGCAAGAACATAATGCAATTGCTCCAACACCAAAATCCTACATAGGAGTTAGGAAGAGAAAATGGGGAAAATTTGTTTCAGAAATAAGGGAGCCAGGTAAGAAAAGTAGAATATGGCTAGGAAGCTATGAAGAACCAGAAATGGCTGCAGCCGCATATGATGTAGCGGCTTATCGGCTTAAAGGGCGCGCCGCTAGGCTCAATTTTCCTGAATTAATTGAGAATTTACCACAACCAGCAAGTTCAAATGCTGAGGATATTCGTGTCGCGGCCCAACAAGCAGCATTGCAATTCAAAGAGATAGCAAATGAAGGGGGTGTTAATAGCAATGGTAGTGTTGTTCCTACAAGGGTTGGACTTTCACCTTCTCAAATTCAAGCAATTAATGATTCTCCTTTGGATTCACCTAAGATGTGGATGCAAATGAGTGAGGCACTCATCTTTGGATTTGAATTTGATGATCAGTCTTCTAGGATGGTCAATTATAATTATGataataataataataataataataataataatagtaatGTTTTAGAGTTGAGTGAATGGGAAGAAATTCAGTATGAGTCGTTGTGGGACTCTTGA 606 0.3795 MEESNSMQEHNAIAPTPKSYIGVRKRKWGKFVSEIREPGKKSRIWLGSYEEPEMAAAAYDVAAYRLKGRAARLNFPELIENLPQPASSNAEDIRVAAQQAALQFKEIANEGGVNSNGSVVPTRVGLSPSQIQAINDSPLDSPKMWMQMSEALIFGFEFDDQSSRMVNYNYDNNNNNNNNNNSNVLELSEWEEIQYESLWDS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00147 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF022 3 157 - -
Car08g00147 201 SUPERFAMILY DNA-binding domain 19 77 IPR016177 GO:0003677
Car08g00147 201 Pfam AP2 domain 19 68 IPR001471 GO:0003700|GO:0006355
Car08g00147 201 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Car08g00147 201 PRINTS Ethylene responsive element binding protein signature 58 78 IPR001471 GO:0003700|GO:0006355
Car08g00147 201 CDD AP2 18 78 IPR001471 GO:0003700|GO:0006355
Car08g00147 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 3 157 - -
Car08g00147 201 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Car08g00147 201 Gene3D AP2/ERF domain 18 77 IPR036955 GO:0003700|GO:0006355
Car08g00147 201 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00147 Car-Chr8 1151863 1152482 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00147 5 200 AP2-EREBP Transcription Factor Family AT1G71450 45.500 1.54e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car08g00147 AP2 2.8e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00147 - - cam:101493379 363.614