Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00125 ATGGGGACAAGAAACTTTGTATGGAGTTTTACTAAAAAGTTCATTACATTTGGACTCAttactgtgactgtgtctgatcgttatgttactgttGTTCCTGTTCGAGATGATTATGTCTTGGTTGAGAAACTTTGCCTTCAGAAGTACAAGTTTTCACATGGTGATGTCGTGATCTTTCGTTCCCCATTGGATTACAAAGAGACACACATAAAGAGAATAATTGCATTACCTGGTGAGTGGTTTGTTAATCGTCAAAGCCATGACGTACTAAAGATTCCGGAAGGACACTGTTGGGTCGAGGGAGACAATGTAGTTTCTAGCTCTGATTCAAAATCATATGGACCTATTCCTCTGGGTCTAATTCGAGGAAGGGTTACTCATGTTGTGTGGCCACCTCAAAGAATAGGAGCTGTCAAGAGTACTACACCAGAAAGATTACCTTCTTTATAG 450 0.3711 MGTRNFVWSFTKKFITFGLITVTVSDRYVTVVPVRDDYVLVEKLCLQKYKFSHGDVVIFRSPLDYKETHIKRIIALPGEWFVNRQSHDVLKIPEGHCWVEGDNVVSSSDSKSYGPIPLGLIRGRVTHVVWPPQRIGAVKSTTPERLPSL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00125 149 Gene3D Umud Fragment, subunit A 14 144 - -
Car08g00125 149 CDD S26_SPase_I 37 125 IPR019533 GO:0004252|GO:0006465
Car08g00125 149 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 145 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Car08g00125 149 Pfam Signal peptidase, peptidase S26 88 130 IPR019533 GO:0004252|GO:0006465
Car08g00125 149 Pfam Signal peptidase, peptidase S26 35 79 IPR019533 GO:0004252|GO:0006465
Car08g00125 149 PRINTS Bacterial leader peptidase 1 (S26A) family signature 69 81 IPR000223 GO:0006508|GO:0008236|GO:0016020
Car08g00125 149 PRINTS Bacterial leader peptidase 1 (S26A) family signature 92 111 IPR000223 GO:0006508|GO:0008236|GO:0016020
Car08g00125 149 SUPERFAMILY LexA/Signal peptidase 36 138 IPR036286 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00125 37 141 MADS-box Gene Family AT1G29960 38.739 1.25e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00125 K09648 - gmx:100527429 231.106