Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00121 ATGATGAGGCTGAAGACATATGCTGGTCTTAGTTTGATTGCAACTCTGGCTATTGCATACCATGCATTTAATAGTAGAGGCCAGTTTTATCCGGCAATGGTGTATCTTTCAACTTCCAAGATCAGTTTGGTGCTTCTTCTCAACATGGGTTTGGTTATTATGTGTGTTCTGTGGCAACTAACCAAAAAAATATTTTTGGGTTCACTTCGAGAGGCGGAGGTCGAGAGGCTTAATGAGCAATCGTGGAGGGAGGTTATGGAGATCCTCTTTGCGATTACTATTTTTAGGCAGGACTTTTCGGTTACATTCCTTGCGATGGTCACTGCACTGTTGTTGATTAAGGCTTTGCATTGGTTGGCTCAAAAGAGAGTAGAGTATATTGAGACCACTCCTTCGGTGACCACATTGTCCCATATTCGAATTGTATCTTTTATGGGTTTTCTTCTTCTTCTAGATAGCATTTTCTTATACAGTTCTGTGAAGCATTTGATAGAAACGTGGCAGGCTTCAGTTTCACTATTCTTTGCTTTTGAGTACATGATACTGGCAACAACAACAGTGTCAATTTTCGTAAAATATGTTTTCTTTGTCAGTGACATGCTTATGGAGGGACAGTGGGAAAAAAAACCAGTCTTCACATTTTACCTGGAACTTATTAGGGACTTGCTGCACTTGTCCATGTATCTGTGCTTCTTCTTTGTTATTTTTGTAAACTACGGTATTCCCTTGCACCTAATACGGGAGCTGTACGAGACATTTAGGAACTTCAAAGTTCGCATTGCAGATTACATTAGATATCGTAAGATCACTTCAAATATGAATGATCGCTTTCCTGATGCAACCCCTGAAGAGCTAATTGCTAGTGATGCAACCTGTATTATCTGTCGTGAAGAGATGACTACAGCAAAGAAACTGATATGTGGTCACCTTTTTCATGTCCATTGCCTCCGATCATGGCTGGAGAGACAGCATAGGTGCCCTACCTGCAGAGCCTTTGTTATACCCCAAGAAAACGGAACGAATGTTGCTGGAGGGCCGCAAGGATCGCAATCAGATAGTCATCGACAGGGTACTGGAAGCACAGGTCAAACTGATCTTGCCAGTGGGGCGGCAACTGATAGTTTGAGTCGGCATCAAGCTAGACTCCAAGCAGCTGCTGCTGCAGCTTCAACATATGAGAAGTCTTATGTTTATCCCTCTGCAACTTCTTTTGTACGATCTCCTGAGTACACTATCTATCCCCCAGTTGCTGAATCTACTAAGGTTGATCTTAATGGAGAACAAGCTTCCAGTCAACAAGCTCAGAAGCAGTTTCATATCCCTGGTGGCCCAACAAATGTACCTTTTCCTCCAATGGGACACTTCCATTTTCTTCCTTCCCATCCACATGCTGCCCCTTTGAATTATGGAGTTGGGTTGGGAAATGATCCAAATATCTCAAACTTTCAAATGGAAGCTCATAAAAAAGTTTTACAACAACAGATTGAGATTCTGCAAAATCAGCTCCAGAATCTGCAGAGCACCAAGGGTGACAGAAATGTAGATGAAGGCACACCATCATCAGAAAGCAGAGGCAAGCTTAGCACTTCCTAG 1593 0.4244 MMRLKTYAGLSLIATLAIAYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCVLWQLTKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPSVTTLSHIRIVSFMGFLLLLDSIFLYSSVKHLIETWQASVSLFFAFEYMILATTTVSIFVKYVFFVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYLCFFFVIFVNYGIPLHLIRELYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELIASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHRCPTCRAFVIPQENGTNVAGGPQGSQSDSHRQGTGSTGQTDLASGAATDSLSRHQARLQAAAAAASTYEKSYVYPSATSFVRSPEYTIYPPVAESTKVDLNGEQASSQQAQKQFHIPGGPTNVPFPPMGHFHFLPSHPHAAPLNYGVGLGNDPNISNFQMEAHKKVLQQQIEILQNQLQNLQSTKGDRNVDEGTPSSESRGKLSTS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00121 530 PANTHER RING ZINC FINGER PROTEIN 1 444 - -
Car08g00121 530 MobiDBLite consensus disorder prediction 502 530 - -
Car08g00121 530 MobiDBLite consensus disorder prediction 340 375 - -
Car08g00121 530 PANTHER - 1 444 - -
Car08g00121 530 Coils Coil 481 508 - -
Car08g00121 530 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 339 IPR013083 -
Car08g00121 530 SMART ring_2 292 329 IPR001841 -
Car08g00121 530 CDD RING-H2_synoviolin 289 330 - -
Car08g00121 530 Pfam Ring finger domain 291 330 IPR001841 -
Car08g00121 530 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Car08g00121 530 SUPERFAMILY RING/U-box 272 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00121 Car-Chr8 927818 932678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00121 1 526 C3H Transcription Factor Family AT3G16090 64.991 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00121 K10601 - gmx:100816441 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00121 08 927818 932678 Car08g00121 08 927818 932678 ECH