Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00118 ATGTTGTCAGTAGCTCCTTCCGTTGATGCCAAACAGACCACAGAAGTGTCTGCTTCTGTCACCAAACTTAACACACAGCAACAAGAGCCTACtgattttaatcataatcataatcatgatcgtgatgataatactaattctattatttCTTCCCAAAATAACCTTATTTTCAAATCTAAATTACCAGATATACCACTCTCTAACCACCTCCCACTTCACACCTACTGCTTCGAAAAACTACCCGAAATCACCGATCGTCCTTGTCTCATCGTTGCTTCCACCGGAAAAATCTACACCTATGGTGAAGCTCATCTCCTCTCTCGTAAAATCGCTGCCGGTATGTCAAAACTCGGAATCCAAAAAGGCGATGTAATCATGATTCTCCTCCAAAATTCAGCGGAATTCGTTCTCTCTTTCATCGCCGCTTCAATGATCGGCGCCGTCGCAACCACCGCTAATCCGTTTTACACAGCCGCTGAACTCTTCAAACAACTAACCGTTTGCAAGACGAAGCTGATCATCACGCAAGCAATGTACGTTGATAAACTCAAACAGAACGAAGAGAACGGTGAATTCGACTTCAAGATAATAACCGTCGACGAACCGCCGGTGAATTGTCTCCATTTCTCGGTGATTTCCGAAGGAAATGAAGAGGAATTGCTGGAAGTGGAGATCGATCCGGAAGACGCGGTGGCTCTTCCGTTTTCTTCCGGAACAACGGGATTACCTAAAGGAGTTATTCTAACGCACAAGAGTTTAACAACGAGTGTTGCTCAACAAGTCGACGGAGAGAATCCGAATCTGTATTTAACAACAGAAGATGTACTTCTATGCGTTCTTCCGTTGTTTCACATATTCTCTCTCAACAGTGTGCTATTGTGCGCACTGAGAGCAGGGAGTGCGGTTCTGTTAATGCACAAATTCGAGATCGGAACATTGCTTGATGTAATACAGAAACACAGAGTGACGGTGGCGATGGTCGTTCCTCCGTTAGTTTTGGCGTTAGCGAAGAATCCATCGGTGGCGGAGTTTGACCTTAGTTCAATACGGTTGGTGCTTTCCGGAGCTGCACCGTTAGGGAAGGAACTCGAAGAAGCTCTCCATAACAGAATTCCTCAGGCCGTTTTGGGACAGGGGTACGGTATGACAGAGGCAGGGCCAGTACTGTCCATGTCTTTGAGCTTTGCAAAGCAGCCACTCCCAACAAAGTCAGGCTCATGTGGCACTGTTGTAAGAAATGCAGAGCTCAAAGTTCTAGACCCTGAAACTGGTCACTCTCTTGGTTATAATCAACCTGGTGAAATCTGCATCAGAGGCCAACAAATCATGAAAGGATATTTGAACGATGAGAATGCAACAAAAACTACTATTGATGAGGAGGGTTGGCTTCATACTGGTGATGTTGGCTATATAGACGACGATGATGAGATTTTCATTGTTGACAGGGTGAAGGAACTTATCAAGTTCAAAGGCTTCCAAGTGCCCCCTGCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTGAACTTGAAGGACTTCTAGTAAGCCATCCATCTATTGCAGATGCTGCTGTTGTCCCTCAAAAGGATGTTGCTGCTGGTGAAGTTCCAGTTGCCTTTGTGGTAAGATCAAATGGATTTGATCTAACTGAAGAGGCTGTGAAGGAGTTTATATCCAAACAGGTGGTGTTTTATAAAAGACTGCACAAAGTTTATTTCATTCATGCAATTCCTAAGTCTCCTGCAGGAAAGATATTGAGGAAAGACCTGAGAGCAAAACTAGAAAACGCCACCCAAACTATTTAG 1989 0.3896 MLSVAPSVDAKQTTEVSASVTKLNTQQQEPTDFNHNHNHDRDDNTNSIISSQNNLIFKSKLPDIPLSNHLPLHTYCFEKLPEITDRPCLIVASTGKIYTYGEAHLLSRKIAAGMSKLGIQKGDVIMILLQNSAEFVLSFIAASMIGAVATTANPFYTAAELFKQLTVCKTKLIITQAMYVDKLKQNEENGEFDFKIITVDEPPVNCLHFSVISEGNEEELLEVEIDPEDAVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGTLLDVIQKHRVTVAMVVPPLVLALAKNPSVAEFDLSSIRLVLSGAAPLGKELEEALHNRIPQAVLGQGYGMTEAGPVLSMSLSFAKQPLPTKSGSCGTVVRNAELKVLDPETGHSLGYNQPGEICIRGQQIMKGYLNDENATKTTIDEEGWLHTGDVGYIDDDDEIFIVDRVKELIKFKGFQVPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFISKQVVFYKRLHKVYFIHAIPKSPAGKILRKDLRAKLENATQTI 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00118 662 Gene3D - 483 660 IPR045851 -
Car08g00118 662 CDD 4CL 66 651 - -
Car08g00118 662 Gene3D - 48 482 IPR042099 -
Car08g00118 662 MobiDBLite consensus disorder prediction 13 32 - -
Car08g00118 662 PANTHER 4-COUMARATE--COA LIGASE 3 56 654 - -
Car08g00118 662 MobiDBLite consensus disorder prediction 13 45 - -
Car08g00118 662 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 56 654 - -
Car08g00118 662 Pfam AMP-binding enzyme C-terminal domain 570 645 IPR025110 -
Car08g00118 662 SUPERFAMILY Acetyl-CoA synthetase-like 59 497 - -
Car08g00118 662 SUPERFAMILY Acetyl-CoA synthetase-like 569 657 - -
Car08g00118 662 Coils Coil 569 574 - -
Car08g00118 662 ProSitePatterns Putative AMP-binding domain signature. 233 244 IPR020845 -
Car08g00118 662 Pfam AMP-binding enzyme 85 489 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00118 Car-Chr8 915040 920928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00118 56 496 Monolignol Biosynthesis Gene Families AT1G65060 72.973 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00118 K01904 - gmx:547492 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00118 08 915040 920928 Car08g00118 08 915040 920928 ECH