Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00107 ATGGTGGATGGAGGAGGTGGAGTTGGGGTAAGAAGTGTGAATGAAGAAGAAATCAAGTGGCCACCATGGTTGCAACCACTTCTCCAAACAAGCTTCTTTGTTCAATGCAAAGTGCATGTAGATTCCAACAAAAATGAATGCAATATGTATTGCTTGGATTGTATGAATGGAGCCCTTTGTTCTACTTGTCTTGCTTCTCATAAACAACATAGAGTTATTCAGATAAGAAGATCTTCATACCATGATGTGATAAGGGTATCTGAGATACAGAAATTTGTGGACATAACAGGGGTGCAAACTTATGTTATAAACAGTGCAAAAATTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGCAAAGGAGTTACCAATACATGTCATGTTTGTGAAAGAACCCTTCTTGATTCATTCACCTTTTGTTCCCTTGGTTGTAAGATAGTTGGAACCTCCAAGAAATTCCAAAAGAAAAATGAGTGTGATGGTGAAGAATCAATTAGTAGTGGAAGTGGCAGAAACAGAAACAGAATTCAGAGCTTCACACCTTCAACACCACCACCTTACAAAACTGCTAAGAGAAGGAAAGGGGTCCCACATAGAGCCCCAATGGGTGGAGGCCTTATTATAGAATACAGTTTATACTAA 645 0.3953 MVDGGGGVGVRSVNEEEIKWPPWLQPLLQTSFFVQCKVHVDSNKNECNMYCLDCMNGALCSTCLASHKQHRVIQIRRSSYHDVIRVSEIQKFVDITGVQTYVINSAKIVFLNERPQPRPGKGVTNTCHVCERTLLDSFTFCSLGCKIVGTSKKFQKKNECDGEESISSGSGRNRNRIQSFTPSTPPPYKTAKRRKGVPHRAPMGGGLIIEYSLY 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00107 214 Pfam PLATZ transcription factor 76 147 IPR006734 -
Car08g00107 214 MobiDBLite consensus disorder prediction 164 186 - -
Car08g00107 214 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 206 - -
Car08g00107 214 MobiDBLite consensus disorder prediction 159 201 - -
Car08g00107 214 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00107 Car-Chr8 829311 831378 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Car08g00107 PLATZ 4.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00107 - - gmx:100792668 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00107 08 829311 831378 Car06g02031 06 20290220 20292636 ECH
Car08g00107 08 829311 831378 Car08g00107 08 829311 831378 ECH