Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00067 ATGGCAGAACCTGCATATACTGTGGCATCTGACAGTGAAACCACTGGGGAAGAAAAGTCGTTGCCTTTACCTGAAATAGCGATTGGAATTGATATTGGCACCTCACAATGCAGTGTTGCTGTGTGGAATGGTTCCCAAGTGGAGCTTTTGAAAAACAAAAGAAATCAGAAGCTTATGAGATCATATGTGACTTTCAAAGATGAATCCCCTTCTGGTGGAGTTAGCAGTCAACTCTCCCATGACATTGATATGCTGTTTGGAGATACAATTTTCAATATGAAACGCCTCATTGGTAGAGTTGATACTGACCCTGTAGTCCATGCAAGTAAAAATCTCCCATTTTTGGTGCAGACATTGGACATTGGCGTTCGACCTTTTATCGCTGCATTAGTGAACAATGTTTGGAGATTCACCAGTCCGGAAGAAGTTCTTGCAATGTTTCTTGTGGAATTAAGACTAATGACTGAAACTCATCTGAAACGACCGATAAGAAATGTAGTGCTGACAGTTCCGGTTTCATTTAGTCGTTTCCAGCTGACTCGAGTAGAGCGTGCTTGTGCGATGGCTGGTCTACATATTCTCAGGCTGATGCCTGAACCAACAGCAGTGGCATTGTTGTATGGACATCAACAACAGAAAGTTTCTCATGAAACCATGGGCAGTGGAAGTGAGAAAATTGCTCTGATTTTCAATATGGGCGCTGGTTATTGTGATGTTGCTGTGACTGCTACCGCAGGAGGAGTATCCCAGATAAAAGCCTTGGCAGGAAGTACCATTGGTGGAGAAGACTTGCTTCAGAATATGATGCGCCATCTGTTACCAGATTCTGAAAATATATTCAAGAGTCACGGCGTCAAAGAGATTAAATCAATGGGATTGCTTCGAGTTGCTACGCAGGATGCAATTCATCAGCTTTCTTCTCAAACTAGTGTTCAGGTTGATGTAGACTTGGGAGATGGTTTGAAGATATGCAAGGTTGTTGACAGGGCGGAGTTTGAGGAAGTTAACAGAGAGGTGTTTGAAAAGTGTGAACGCCTTATCATCCAGTGTTTACATGATGCAAAGGTAGAAGTTGAGGAGATAAATGATGTGATAATTGTTGGTGGATGTTCTTATATACCAAGGGTGAAGAATCTTGTTAGCAACATATGTAAAGTAACAGAATTTTATAAAGGTATTAATCCTTTGGAAGCTGTTGTTTGTGGTGCTGCGATGGAAGGAGCTGTTGCTTCAGGCATAATTGATCCCTTTGGAAACTTAGACTTGTTAACGATTCAAGCCACACCTCTTGCCATTGGAATTCGAGCTGATGGGAACAAGTTTGTCCCTGTAATTCCGAAGAACACCACAATGCCAGCGCGTAAGGATATACTTTTCACAACGATTCATGATAATCAAACCGAGGCATTGATTCTTGTCTACGAAGGCGAGGAAAATAATGCAGAACAAAATGCTTTGTTGGGATATTTCAAGATCATGGGAATTCCTCTAGCACCAAAAGGAGTTCCTGAAATCAATATATGCATGGACATAGATGCCGCAAACGTGCTTAGAGTTTTAGCTGGTGTTGTGATGCCTGGATCCCGTGAACCTGTGGTTCCTGTTATGGAAGTGAGAATGCCGATGGTTGATGATGGGCATGGTTGGTGTGCTGAGTCTCTAAATAGAACCTATGGTGCCACAATGGATTTGGTTACTCTGAAGAAGGCATAA 1713 0.4227 MAEPAYTVASDSETTGEEKSLPLPEIAIGIDIGTSQCSVAVWNGSQVELLKNKRNQKLMRSYVTFKDESPSGGVSSQLSHDIDMLFGDTIFNMKRLIGRVDTDPVVHASKNLPFLVQTLDIGVRPFIAALVNNVWRFTSPEEVLAMFLVELRLMTETHLKRPIRNVVLTVPVSFSRFQLTRVERACAMAGLHILRLMPEPTAVALLYGHQQQKVSHETMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMRHLLPDSENIFKSHGVKEIKSMGLLRVATQDAIHQLSSQTSVQVDVDLGDGLKICKVVDRAEFEEVNREVFEKCERLIIQCLHDAKVEVEEINDVIIVGGCSYIPRVKNLVSNICKVTEFYKGINPLEAVVCGAAMEGAVASGIIDPFGNLDLLTIQATPLAIGIRADGNKFVPVIPKNTTMPARKDILFTTIHDNQTEALILVYEGEENNAEQNALLGYFKIMGIPLAPKGVPEINICMDIDAANVLRVLAGVVMPGSREPVVPVMEVRMPMVDDGHGWCAESLNRTYGATMDLVTLKKA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00067 570 Pfam Hsp70 protein 27 522 IPR013126 GO:0005524|GO:0140662
Car08g00067 570 Gene3D Actin; Chain A, domain 4 261 342 - -
Car08g00067 570 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 423 528 IPR029047 -
Car08g00067 570 SUPERFAMILY Actin-like ATPase domain 26 210 IPR043129 -
Car08g00067 570 Gene3D - 212 390 - -
Car08g00067 570 Gene3D - 28 408 - -
Car08g00067 570 PRINTS 70kDa heat shock protein signature 26 39 - -
Car08g00067 570 PRINTS 70kDa heat shock protein signature 54 66 - -
Car08g00067 570 PRINTS 70kDa heat shock protein signature 166 186 - -
Car08g00067 570 PRINTS 70kDa heat shock protein signature 361 377 - -
Car08g00067 570 PRINTS 70kDa heat shock protein signature 393 413 - -
Car08g00067 570 PRINTS 70kDa heat shock protein signature 421 440 - -
Car08g00067 570 PRINTS 70kDa heat shock protein signature 502 518 - -
Car08g00067 570 SUPERFAMILY Actin-like ATPase domain 223 409 IPR043129 -
Car08g00067 570 Gene3D - 91 146 - -
Car08g00067 570 PANTHER HEAT SHOCK PROTEIN 70KDA 4 569 IPR013126 GO:0005524|GO:0140662
Car08g00067 570 CDD HSP70_NBD 28 408 - -
Car08g00067 570 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 419 534 IPR029047 -
Car08g00067 570 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 4 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00067 Car-Chr8 603268 605757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00067 27 533 Calmodulin-binding Proteins AT3G12580 37.259 1.00e-103 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00067 K09489 - gmx:100809773 971.459