Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00056 ATGGCTTATTCTTTAACTTCCAACAACAAAAAAGAGATTGAAAAAGAGCTTCTACCCCTTATACGTGTCTACAAAGATGGAAGTGTAGAACGTCTTATAGAGTCTCCAATAGTTCCACCTTCCCTTCAAGACCCTCAAACCAATGTCTCATCCAAAGACATTATCATCTCCAACAATAATCCTTCCCTCTCTGCTCGCATTTTCCTTCCATATTCCCACAAACACAATAACAAAAAGCTTCCCATCTTTCTCTACTTTCATGGCGGCGCTTTTTGCGTCGAATCAGCCTTCTCTTCTTTATACCATAATTACCTCAATATCTTAGTTTCTGAATCAAATATAATAGCTGTGTCTGTTGATTATAGACTCCTTCCACATCATCCTCTTCCTGCAGCTTATGAAGATGGTTGGATTTCTCTTCAATGGCTTGCTTCTCACACAAGCAATGAAATCAACAATAATAACAAAGAACAATGGTTACTAGATTATGGTGATTTCAACAAAGTTTACATTGGTGGTGACACCAATGGTGCTAACCTTGCTCATAACATAGCTATGCGTGCTGGAACTGAAACATTACCAAACAATCTTAAAATATTTGGTGTATTACTCTGTAGTCCTTTTTTTTGGGGTTCAAAGTCAATTGGGTTAGAAGCTTTGGAAGACAATGAACGTCATGGATTGGCTATTAAAGTTTGGAACTTTGTGTATCCTAATGCAAAGGGTGGAATTGATAATCATATGGTTAATCCTTGTGCTGATGATGCACCTAATTTGGCTACACTTGGTTGTTCTAAGATGCTAGTTACTGTTACTGATAAAGATGAGTTTAGAGACAGAGATCTTTTGTATTATGACTCTGTTAGAAAAAGTGGATGGCAAGGTCAACTTGAATTGTTTGAAGCTGGAGATGAGGAACATGGTTTTCAGATATTCAATCATCAAACTCATACGGCTAAAAACTTCATCAAACGTTTGGCTTCTTTTCTTGTTTGA 996 0.3705 MAYSLTSNNKKEIEKELLPLIRVYKDGSVERLIESPIVPPSLQDPQTNVSSKDIIISNNNPSLSARIFLPYSHKHNNKKLPIFLYFHGGAFCVESAFSSLYHNYLNILVSESNIIAVSVDYRLLPHHPLPAAYEDGWISLQWLASHTSNEINNNNKEQWLLDYGDFNKVYIGGDTNGANLAHNIAMRAGTETLPNNLKIFGVLLCSPFFWGSKSIGLEALEDNERHGLAIKVWNFVYPNAKGGIDNHMVNPCADDAPNLATLGCSKMLVTVTDKDEFRDRDLLYYDSVRKSGWQGQLELFEAGDEEHGFQIFNHQTHTAKNFIKRLASFLV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00056 331 Pfam alpha/beta hydrolase fold 84 310 IPR013094 GO:0016787
Car08g00056 331 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 11 330 - -
Car08g00056 331 SUPERFAMILY alpha/beta-Hydrolases 20 330 IPR029058 -
Car08g00056 331 Gene3D alpha/beta hydrolase 6 331 IPR029058 -
Car08g00056 331 PANTHER ARYLACETAMIDE DEACETYLASE 11 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00056 Car-Chr8 512914 514199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00056 12 330 Carbohydrate Esterase AT3G48700 37.538 7.24e-77 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00056 - K13258 gmx:547489 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00056 08 512914 514199 Car08g00056 08 512914 514199 ECH
Car08g00056 08 512914 514199 Car04g01345 04 13799748 13801129 PCT
Car04g01344 04 13797489 13798472 Car08g00056 08 512914 514199 PCT