Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00048 ATGTTAAATCCATGGATATGTCAATTATTATCATTTTTACTAGTAGCATTTTTAATTTCATGTGAAGGTCAAGATCCTGAGGCTCTCCCACCCGCAGCAGAAAACTGTAACGGCGTTTTCATTTCTTATGATTTAATTGATCGAAGAAAAGAATTCCCACGTGTCAAAAACGTGACAGCACAATCATGGGCCTTCAATGCCACTGCAACAATCCTCAATACAGGAAAAGATGTTGTTAAAACATGGCAGTTATTCATAGGTTTTCAACATCAAGAAATTCTTGTCTCTGCCAATGGTGCTATTCTATTCCAAGCTGGTGACTTTCCTGCTTTTGTTGGTAATGGAACAACCTTTGTTGGTAGTTCTATTCCAGATTTGGAAACCTCCATCAACACAGCAAATGATCTCTCCCAAATTCAAGCTATCATTAAACTTTCTGGCACACAATTTGGTGTTAAGCCACCATCAGTTCCTATGCCTAAAAACATCAAGTTGCTAACTGATGGATATAACTGCCCCCGCCCAAGTATCCGTAAGAGTTCCATGTGGGCGTGTTGTAAAAGAGACCCAAAACACAAGTCGATACATTCAAAGACAAAATTCTTGCCACGTCAGAAAGGGGATTTGACAATATCCTATGATATTCTTCAAGCATATGACAATAACTATCTTGTTCAAGTTACCTTAGAGAATCAAAGTCCTTTAGGACGTTTAGATCGTTGGAACTTAACATGGGAATGGACAAGAGGTGAATTCATATCCACAATGAAAGGTGCTTTTCCACGTGAGATAGATTACTCTGATTGTATCTATGGTGCTGCTGGACAGTATTATAAAGATATGGATTTCACTAAAGTACTTAATTGTCAAAAGAATCCTGTAATCAGTGATTTGCCTCCACAGAAATACAATGATACTGAACTTGGTAAAATACCATTTTGTTGTAGAAATGGTTCTATTTTACCTATCATTATGGATCCAACTCAATCAAAATCTGTTTTCCAAATGCAAGTGTTTAAAGCTCCACCTGATTTGGATAAAACATCACTTTATCCACCTGAAAAATGGAAAATAATGGGTATTCTTAATCCTTATTATAAATGTGGTGCACCATTAAAGGTGGAACCTTCTACATTTCCTGATCCTAGAGGACTTGAAGCTACTGTTTTCACTATTGCTAGTTGGCAAATAATTTGCAATATATCAAAACCAGTTAAGAGGAACACTCGATGTTGTGTTTCTTTCTCTGCTTATTATAATGATTCTGTTGTTCCTTGTAACACATGTGCATGTGGTTGTGATGAAGGTGATACCAAAACAGAACATTGTAATCAGAATGCAAGAGCAATGCTTCTACCTCCAGAAGCACTTCTTGTACCTTTTGAAAACAGGACACTTAAGACAGTTGCTTGGGCTAAATTAAAGCATTTACATGTGCCTAAGAAATTACCATGTGGTGATAACTGTGGAGTTACCATAAATTGGCATGTAGTTTCAGATTTTAAAGGTGGATGGAGTGCTAGAATCACTTTATTTAATTGGCAACCTTTTCATTTTCAGAATTGGTTCACTGCATTGCAATTTAAGAAGAGGGTTTCTATTGGTTTTGAGAAAGTTTACTCTTTTAATGGAACACTCTTGAAAAAAATCAATAACACTATTTTCATGCAAGGATTACAAGGAGCAAATTATTTGATAGCTGAAGACAATGGAACAAATCCAAAGGTGCCTGGAAAACAACAATCTGTTATTTCATTTACAAAGAAATTCACACCATATATTCAAATAGCAAAAGGAGATGGGTTCCCTACAAAAGTTCTTTTTAATGGAGAGGAGTGTTCTATTCCTACACAATTCCCTGTGAGAAGTGGAAACCAATTACCAAATGTATATTTAGTACAACAAATGTTGTTAGTCTTAGTTTTAGCTTTTACATTGAATCAAATATTGTATTAG 1956 0.3569 MLNPWICQLLSFLLVAFLISCEGQDPEALPPAAENCNGVFISYDLIDRRKEFPRVKNVTAQSWAFNATATILNTGKDVVKTWQLFIGFQHQEILVSANGAILFQAGDFPAFVGNGTTFVGSSIPDLETSINTANDLSQIQAIIKLSGTQFGVKPPSVPMPKNIKLLTDGYNCPRPSIRKSSMWACCKRDPKHKSIHSKTKFLPRQKGDLTISYDILQAYDNNYLVQVTLENQSPLGRLDRWNLTWEWTRGEFISTMKGAFPREIDYSDCIYGAAGQYYKDMDFTKVLNCQKNPVISDLPPQKYNDTELGKIPFCCRNGSILPIIMDPTQSKSVFQMQVFKAPPDLDKTSLYPPEKWKIMGILNPYYKCGAPLKVEPSTFPDPRGLEATVFTIASWQIICNISKPVKRNTRCCVSFSAYYNDSVVPCNTCACGCDEGDTKTEHCNQNARAMLLPPEALLVPFENRTLKTVAWAKLKHLHVPKKLPCGDNCGVTINWHVVSDFKGGWSARITLFNWQPFHFQNWFTALQFKKRVSIGFEKVYSFNGTLLKKINNTIFMQGLQGANYLIAEDNGTNPKVPGKQQSVISFTKKFTPYIQIAKGDGFPTKVLFNGEECSIPTQFPVRSGNQLPNVYLVQQMLLVLVLAFTLNQILY 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00048 651 Pfam COBRA-like protein 223 402 IPR006918 GO:0010215|GO:0031225
Car08g00048 651 PANTHER COBRA-LIKE PROTEIN 7 21 647 - -
Car08g00048 651 PANTHER COBRA-LIKE PROTEIN 7 21 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00048 Car-Chr8 423722 426023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00048 30 646 COBRA Gene Family AT3G20580 57.717 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00048 - - mtr:MTR_5g005590 1077.77