Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00037 ATGCGGGGAggaaacgtcaccggcaacggcaacggcaacgAAGATCGATGGGGAACAACCGGAACGGCGATTCGGAAAAAGGGCACGGGTGTTCGGGCATGGCTGGTGGTAGACGGTACTGGAGAGGCGCAGGTGGTTGAGGCCGGAAAACACGCAATCATGAGACGTACCGGCCTCCCCGCACGTGACCTACGAATACTCGACCCTCTTCTTTCCTACCCTTCCACCGTTCTTGGAAGAGAGAGAGCAATCGTCATCAATTTGGAACACATCAAAGCCATCATCACCGCCAATGAAGTTCTTCTTCTCAATTCTAGAGATCCTTCCGTTACCCCTTTCGTTAACGAACTCCAAGCAAGAATCCTCCGTCACCACAACGCCACCACCGCTCCTCATCCTGATAACCAAGACGAATCTCACGGCGGCGGAATCAAGATTCTCCCATTCGAATTCGTAGCGCTTGAAGCGTGCCTTGAGGCGGCTTGTAGCGTGTTGGAGAATGAAGCGAAGACGTTGGAGCAAGAAGCACATCCTGCCCTAGATAAACTGACATCGAAGATCAGTACTCTGAATTTGGAACGCGTTCGTCAAATTAAGAGCCGTTTGGTTGCAATAACAGGTCGTGTTCAAAAAGTGAGAGATGAATTGGAACATTTGCTTGATGATGATGAAGATATGGCTGAGATGTATCTTACAGAGAAGATACTTCAACAGCAATTGGAACAAACCTCttcctctgaagaagaaaaagaagaagaagaagacgttgatgttaatcatgatcatgatcatgatgatgaccatgtggatattcatcaAAGGGCACAGGGTGCTGAAATATCATCGGAAGCGGGTATAGGAGGAGGTGAAAGTAATGAGGATGCTGATGACCAGAATCAAAATTCGGGAGAGGAAATGTATGGTGGTGCTTTAAATATAATTAGCAGGGATAGCCGTGGCACACGTGCAAGCACTACTTACAGTGCCGCCACCAACAAGCTTGACGTTGAGGAGCTTGAGATGCTCTTGGAAGCATACTTTGTCCAGATTGATGGCACTCTCAATAAGCTATCTACGCTGAGGGAGTATGTGGATGACACTGAGGATTACATCAACATTATGCTGGATGACAAACAGAACCATCTACTCCAAATGGGAGTCATGTTGACCACGGCAACTCTGGTGGTCAGTGCCTTTGTTGTTGTGGCTGGTATTTTTGGCATGAATATTCGTATTGAGCTGTTTGATCCTAACTTGTATGGGATGAGAGAGTTCCTCTGGACTGTTGGTGGCGGCACTGCTGGGACCATATTCTTGTATGTGGTTGCCATTGCATGGTGCAAGCACAAACGCTTGCTGGAGTAA 1365 0.4396 MRGGNVTGNGNGNEDRWGTTGTAIRKKGTGVRAWLVVDGTGEAQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITANEVLLLNSRDPSVTPFVNELQARILRHHNATTAPHPDNQDESHGGGIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKILQQQLEQTSSSEEEKEEEEDVDVNHDHDHDDDHVDIHQRAQGAEISSEAGIGGGESNEDADDQNQNSGEEMYGGALNIISRDSRGTRASTTYSAATNKLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIRIELFDPNLYGMREFLWTVGGGTAGTIFLYVVAIAWCKHKRLLE 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00037 454 Gene3D Magnesium transport protein CorA, transmembrane region 108 382 - -
Car08g00037 454 MobiDBLite consensus disorder prediction 246 260 - -
Car08g00037 454 Pfam CorA-like Mg2+ transporter protein 334 437 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Car08g00037 454 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 141 454 - -
Car08g00037 454 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 20 132 - -
Car08g00037 454 Coils Coil 155 175 - -
Car08g00037 454 MobiDBLite consensus disorder prediction 1 18 - -
Car08g00037 454 Coils Coil 233 256 - -
Car08g00037 454 MobiDBLite consensus disorder prediction 282 305 - -
Car08g00037 454 Gene3D - 21 105 - -
Car08g00037 454 MobiDBLite consensus disorder prediction 239 267 - -
Car08g00037 454 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 20 132 IPR039204 -
Car08g00037 454 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 141 454 IPR039204 -
Car08g00037 454 MobiDBLite consensus disorder prediction 1 22 - -
Car08g00037 454 CDD Mrs2_Mfm1p-like 34 452 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00037 Car-Chr8 323397 326272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00037 34 454 MRS2 Gene Family AT3G19640 64.348 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00037 - - gmx:100819578 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00037 08 323397 326272 Car08g00037 08 323397 326272 ECH