Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03427 ATGGATGAGGCAATAATGGAGGAGGTCGTGAGAGGGCGTGAGTTTGCTGATGAACTTAGACAAATACTAGTTGATGTTGCAGTGGTGAAGATGAATCATGCCCATCATCTACTCAACAACATTCTCAACTCATTTACCAACACACTCTTCCTTTTGAACAAACATCAGAATCAAATTAAGGACTTTTCCTTCACGACTAAATCTGAGGACTCTCAAGATAGTTCCGCCACTGGTAGAGGATCTTACAAAAGAAGAAAAAGTACAGAAACATGGGAGAAGGTGTCAGAAAGTGAAACAGATGATGGACATCAATGGAGAAAGTATGGACAAAAAACGATCCAGACTTCCAAATATGCAAGGAACTACTACAGATGCAGTCACAAATTTGAAGAAAGATGCGACGCAACCAAACAGGTGCAGAGAATTCAAGAGAAGCCTCCATTGTATAAGAGCACCTATTACACCCACCACACTTGCAAATACTTACCAAACCCTGCAGATATCATATTTGATCCTCCTCATCACACCAATTCCTCCATATTACTTTCTTTTAACAACACTTTTCCAACTCCAACCAAACAAGATTGCTCCTTTTTATCATCTTCATCTTTTTCTTGTAATAAGGAGGAATTAGTAATTCCCTCACCTAATAATTCCTTCGATATTGATCATCAGCACCTCCCCCCTCCTGTTCATCAGCACATCATCTTAGATGATAATActcctcctcctcctcctcctcctcctcTATTATCAACTCTTCAATTTCATGATCATGATGATGATATCATGTATGGCCTCTTCTATCATGATTCTCTTCATCATCACGATGATCATTTTTTCCACCCTTTTCCTGAGTTTTCATAA 867 0.3725 MDEAIMEEVVRGREFADELRQILVDVAVVKMNHAHHLLNNILNSFTNTLFLLNKHQNQIKDFSFTTKSEDSQDSSATGRGSYKRRKSTETWEKVSESETDDGHQWRKYGQKTIQTSKYARNYYRCSHKFEERCDATKQVQRIQEKPPLYKSTYYTHHTCKYLPNPADIIFDPPHHTNSSILLSFNNTFPTPTKQDCSFLSSSSFSCNKEELVIPSPNNSFDIDHQHLPPPVHQHIILDDNTPPPPPPPPLLSTLQFHDHDDDIMYGLFYHDSLHHHDDHFFHPFPEFS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03427 288 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 215 IPR044810 GO:0003700
Car07g03427 288 Pfam WRKY DNA -binding domain 100 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g03427 288 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 215 - -
Car07g03427 288 MobiDBLite consensus disorder prediction 66 88 - -
Car07g03427 288 Gene3D WRKY domain 85 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g03427 288 SUPERFAMILY WRKY DNA-binding domain 97 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g03427 288 SMART WRKY_cls 99 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g03427 288 ProSiteProfiles WRKY domain profile. 94 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03427 Car-Chr7 62371139 62372312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03427 1 191 WRKY Transcription Factor Family AT1G66550 30.198 2.45e-24 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car07g03427 WRKY 1.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03427 - - cam:105852555 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01410 03 59401842 59403953 Car07g03427 07 62371139 62372312 PCT