Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03419 ATGCTGGACTACGAATGGGGAAACCCGTCTAACATAATGCTTACCGGAAATGAAGACGCCTCCGCCGCAGCAGCCTCCGATCAAGCTCACCGTCAATTATTCGACCACTACACTTCTCAAACCATGTTATCCGACAACTACCTACACCACCCATCTGGGCCCAACATCAACATAAACACAACTGATTTCACTCACCACCACTTTAACCCACAACAACAGCACCATATGCATCACCCTTTCTTTGACCCACGCGCTTACCAAGCCGCGTCCTCAACAAATTCCTACCCTCCACCCCAACCACCACCACCTCCTTCCATGCTCTCCCTCGACCCACTCCCTCATGTAAACACACATAACTGTGCCCCTGGACTCCTCCTCGTCCCTAAATCTGAAGACGTTGGAAGGCCCATGGACTTCGTCGGCTCCAGAATTGGACTCAACCTAGGCGGCCGCACCTACTTTTCCTCTTCTGAAGACGACTTCGTCACCCGCCTCTACCGCCGTTCCAGACCACCTGAACCTGGTTCTTCTGCTTCCTCCAACTCCCCAAGGTGTCAGGCCGAAGGATGCAATGCTGATCTGTCTCAGGCCAAGCACTACCACCGCCGACACAAGGTCTGCGAGTTTCACTCCAAGGCCGCCACCGTTATCGCTGCTGGCTTGACTCAGCGATTCTGCCAGCAATGCAGCAGGTTTCATCTTCTTTCTGAGTTTGATAATGGAAAACGTAGCTGCAGGAAGAGATTAGCTGATCATAATCGTCGCAGAAGAAAAACTCAGCACCCAAATACTCAAGATATTCACAAATCTCACAATACTTTGGAAATTCCTGCAAGATCCCCGCCGGAGTCGGGAACCCAATCTTCATCGTCGGTGACGGTGGCGGTGTCGCCGCCGGATTATTTTAGACAAAGGCCATACCAAAGCACAAGTCCTTCAACAACTTCAAGCTCAATGTTTTTCACCAGCGGGTAG 975 0.5149 MLDYEWGNPSNIMLTGNEDASAAAASDQAHRQLFDHYTSQTMLSDNYLHHPSGPNININTTDFTHHHFNPQQQHHMHHPFFDPRAYQAASSTNSYPPPQPPPPPSMLSLDPLPHVNTHNCAPGLLLVPKSEDVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVTRLYRRSRPPEPGSSASSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQHPNTQDIHKSHNTLEIPARSPPESGTQSSSSVTVAVSPPDYFRQRPYQSTSPSTTSSSMFFTSG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03419 324 MobiDBLite consensus disorder prediction 56 77 - -
Car07g03419 324 MobiDBLite consensus disorder prediction 167 186 - -
Car07g03419 324 SUPERFAMILY SBT domain 183 262 IPR036893 GO:0003677|GO:0005634
Car07g03419 324 MobiDBLite consensus disorder prediction 248 262 - -
Car07g03419 324 Gene3D - 175 246 IPR036893 GO:0003677|GO:0005634
Car07g03419 324 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 74 308 IPR044817 GO:0003677
Car07g03419 324 ProSiteProfiles Zinc finger SBP-type profile. 182 259 IPR004333 GO:0003677
Car07g03419 324 MobiDBLite consensus disorder prediction 266 324 - -
Car07g03419 324 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 74 308 - -
Car07g03419 324 MobiDBLite consensus disorder prediction 248 324 - -
Car07g03419 324 Pfam SBP domain 185 258 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03419 Car-Chr7 62269876 62272581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03419 1 232 SBP-box Gene Family AT1G02065 45.238 3.10e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Car07g03419 SBP 4.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03419 - - gmx:100778566 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03419 07 62269876 62272581 Car07g03419 07 62269876 62272581 ECH