Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03414 ATGGAAAGTGATGGTGGTGATTGCAACAGTACAAGCACACTCTCATTCTCCTCTTcaacaacaacaacaacaacaacatcaaGTTCAAATTCAGATACATGTAGAAAACAATACAGTAAAGAGTCTCCAAAGGGATCAAAAAAGATGATAAAAGAGAGGAAGAAAAGGCAGAGAAGTGAAAGTGATGAAAATATGAAACATCCAACATATAGAGGAGTAAGGATGAGGAATTGGGGAAAATGGGTGTGTGAGATTAGAGAGCCAAGAAAAAAATCAAGAATATGGCTTGGAACATACCCTACAGCTGAAATGGCAGCAAGAGCACATGATGTTGCTGCTTTAGCTATAAAGGGTAATTCAGCATACCTTAATTTCCCTCAATTGGCAAAACAACTTCCAAAGCCAATAAGCACTTCTCCAAAAGACATTCAATTTGCAGCTGCAAAAGCAGCAAACAATACTTCATTTGATTCTCAACAACATGATGATTCTACATTGTTTGATTTACCAGATCTTTTTCCTGATGGAAACAATGGACTTTCTTCTTCTTACTCTTCTTGGAATTTATGTGCAGTTGATACTGGATTAATTAGGCTTGATCAGGAACCATCTTTTTGGGAGAATTATAATTAG 633 0.3507 MESDGGDCNSTSTLSFSSSTTTTTTTSSSNSDTCRKQYSKESPKGSKKMIKERKKRQRSESDENMKHPTYRGVRMRNWGKWVCEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSAYLNFPQLAKQLPKPISTSPKDIQFAAAKAANNTSFDSQQHDDSTLFDLPDLFPDGNNGLSSSYSSWNLCAVDTGLIRLDQEPSFWENYN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03414 210 PANTHER ETHYLENE RESPONSE FACTOR 158 209 - -
Car07g03414 210 PANTHER ETHYLENE RESPONSE FACTOR 10 155 - -
Car07g03414 210 SUPERFAMILY DNA-binding domain 69 127 IPR016177 GO:0003677
Car07g03414 210 Pfam AP2 domain 68 118 IPR001471 GO:0003700|GO:0006355
Car07g03414 210 MobiDBLite consensus disorder prediction 1 68 - -
Car07g03414 210 MobiDBLite consensus disorder prediction 1 36 - -
Car07g03414 210 ProSiteProfiles AP2/ERF domain profile. 69 126 IPR001471 GO:0003700|GO:0006355
Car07g03414 210 Gene3D AP2/ERF domain 69 127 IPR036955 GO:0003700|GO:0006355
Car07g03414 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 158 209 - -
Car07g03414 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 155 - -
Car07g03414 210 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Car07g03414 210 PRINTS Ethylene responsive element binding protein signature 92 108 IPR001471 GO:0003700|GO:0006355
Car07g03414 210 SMART rav1_2 69 132 IPR001471 GO:0003700|GO:0006355
Car07g03414 210 CDD AP2 70 126 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03414 Car-Chr7 62205924 62206722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03414 57 205 AP2-EREBP Transcription Factor Family AT2G44940 46.635 1.82e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Car07g03414 AP2 7.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03414 - - gmx:100801129 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03414 07 62205924 62206722 Car07g03414 07 62205924 62206722 ECH