Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03398 ATGGAGAGTGGTTTTATGTTTAGGAAGAGTGGTCATGAGTTAAAGGGTAGTCTTTGTTTGTTGAAAAGATATGGTTTTTGCAATGTGCAAATTGTTGGGATATGTTTGACTTTTCCTTTTGTTTTTGGTGTTGAGGAAGGGAATTTGGTTGATGAGATTGATGGGttgctttctgatttgagatttctgtttttggattttgattttgCTGCTTCTGTTGAAAGGAATGTGAATGTTTGGCATGAGGTTTGTAGGAAAATAAAAGTGTTTTATGATTTGAATGACGGTAAAGGGGAGATAGTGGAACTCATTGGAAGGAATAAACATGTTATTCTTGAACATGGAGAAAAGGAATTGATTGAAAAGGTTGAGTATTTTTGTAGATTCGGTGTCAAGAAGGTGGAAGTAGCTCGGTTGATTCTACAAGGATCGGAATTGTTGAATCTCGATTTGGAAACGCCGGTGATTAATGTGTTGAAGCTGTTGAAACACATTGGAATGAGCTCCCAAGGTGTTGGGGATGTTAGGAAGAACTATGCCCATGTGTTGGGAACAATAAAAATGGCTAATCTTCCCAATGTGATGAAGGCTATGGGTTTACATGAGTGGTTTTTTGATAAAATCAAAGATGGAAATCATCGGCTGTTAACGAGTTATATCACAAGCTATCCCAATGAAGATCATGATAAAGGTTATAAAAGTTGTTTGAAGACATTTGATGATGCAAGGACGCCAACTCACAATATGAATAAATTGAATTTCATGCATGCTATAGGCTTTGGTGAAAATACTCTCACCATGAATATCTTAACTCACATGCATGGAACAAGTGAAGAGTTACAAAATAGATTTGATTGCCTTCTACGTTTAGGGATTGAATTCTCAAAGCTGTGTAAGATAATAACAAGGCAACCAAAGATTCTAAGCCAGAATCCCGAAATTCTAGAGAAAAAGATTAATTTCCTCTGTCAGGAGATGGGAAACTCCTTAGAGGTTTTGGACACTTTTCCAGCATTTATATGTTTCGACTTAGAGAACCGAATTAAGCCTAGGTTCAGATTCCATATGTGGGTTTTAGAAAAGGGTTTGTCTTCTAAAAACTATTCCATTGCAAGCATGATTGCGACTAGTGACAAGAATTTTGTAGGCCGCGTTTCTAGAATTCACCCGGCCGCCCCAAAACATTGGTTTGAGCAATTCTATCCCAAGAAATTGTGA 1218 0.3621 MESGFMFRKSGHELKGSLCLLKRYGFCNVQIVGICLTFPFVFGVEEGNLVDEIDGLLSDLRFLFLDFDFAASVERNVNVWHEVCRKIKVFYDLNDGKGEIVELIGRNKHVILEHGEKELIEKVEYFCRFGVKKVEVARLILQGSELLNLDLETPVINVLKLLKHIGMSSQGVGDVRKNYAHVLGTIKMANLPNVMKAMGLHEWFFDKIKDGNHRLLTSYITSYPNEDHDKGYKSCLKTFDDARTPTHNMNKLNFMHAIGFGENTLTMNILTHMHGTSEELQNRFDCLLRLGIEFSKLCKIITRQPKILSQNPEILEKKINFLCQEMGNSLEVLDTFPAFICFDLENRIKPRFRFHMWVLEKGLSSKNYSIASMIATSDKNFVGRVSRIHPAAPKHWFEQFYPKKL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03398 405 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Car07g03398 405 SMART mt_12 330 364 IPR003690 GO:0003690|GO:0006355
Car07g03398 405 SMART mt_12 298 329 IPR003690 GO:0003690|GO:0006355
Car07g03398 405 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Car07g03398 405 Gene3D Transcription termination factor 3, mitochondrial 146 400 IPR038538 -
Car07g03398 405 Pfam mTERF 82 184 IPR003690 GO:0003690|GO:0006355
Car07g03398 405 Pfam mTERF 277 381 IPR003690 GO:0003690|GO:0006355
Car07g03398 405 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 12 400 - -
Car07g03398 405 PANTHER CGI-12 PROTEIN-RELATED 12 400 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03398 Car-Chr7 62082451 62086552 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car07g03398 mTERF 5.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03398 - - lja:Lj3g3v0514080.1 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03398 07 62082451 62086552 Car07g03398 07 62082451 62086552 ECH