Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03385 ATGATGAATCTGGAAGCTACAACTCTAGAATCAGATATCGCTCTTCTTGAATCGATTCAACGCTACCTCATCGATGACCATGATGACTTCAACGCAATCTTCGCCGCATCTTACGGCGTCGCTCCGTCTTCCCCCGCCGACAGCGGCAGTAGTGAGTCAATGTCAACAACAACGACTTTTCAATGTAACGCCGAAAACTCTACTTCGAAGGCGCGTGAGACTCACGCGGCTCCTTGTTGGCAGAAATACAAGGGAGTGAGGCGTAGGCCGTGGGGAAAGTTTGCGGCTGAAATTAGAGATTCGAATAAAAACGGCGCAAGGGTGTGGCTTGGGACTTATGACTTGGCTGAGGATGCGGCTTTGGCTTATGACCGAGCTGCTTTCAAGATGCGCGGCTCAAAAGCTAAGGTCAATTTTCCGCATCTGATTGGCTCTTCTTCTGATGTTTCGGAGCCGACAGGTAAGCGGCGTGCGCTGGAGCCGTCTTCTTCCTTGCGGTTGGGTTTGGAGCCGAATAGGAAAATGAGCCGAGTCAATGAAGTTCACACCTCGTAG 555 0.5099 MMNLEATTLESDIALLESIQRYLIDDHDDFNAIFAASYGVAPSSPADSGSSESMSTTTTFQCNAENSTSKARETHAAPCWQKYKGVRRRPWGKFAAEIRDSNKNGARVWLGTYDLAEDAALAYDRAAFKMRGSKAKVNFPHLIGSSSDVSEPTGKRRALEPSSSLRLGLEPNRKMSRVNEVHTS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03385 184 MobiDBLite consensus disorder prediction 140 184 - -
Car07g03385 184 MobiDBLite consensus disorder prediction 44 75 - -
Car07g03385 184 PANTHER DNA-BINDING DOMAIN 6 164 IPR044808 GO:0003700|GO:0009873
Car07g03385 184 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Car07g03385 184 PRINTS Ethylene responsive element binding protein signature 122 142 IPR001471 GO:0003700|GO:0006355
Car07g03385 184 SMART rav1_2 82 146 IPR001471 GO:0003700|GO:0006355
Car07g03385 184 Pfam AP2 domain 82 132 IPR001471 GO:0003700|GO:0006355
Car07g03385 184 CDD AP2 81 142 IPR001471 GO:0003700|GO:0006355
Car07g03385 184 Gene3D AP2/ERF domain 81 141 IPR036955 GO:0003700|GO:0006355
Car07g03385 184 ProSiteProfiles AP2/ERF domain profile. 82 140 IPR001471 GO:0003700|GO:0006355
Car07g03385 184 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 6 164 - -
Car07g03385 184 SUPERFAMILY DNA-binding domain 82 141 IPR016177 GO:0003677
Car07g03385 184 MobiDBLite consensus disorder prediction 44 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03385 Car-Chr7 61970492 61971290 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03385 24 174 AP2-EREBP Transcription Factor Family AT2G44840 50.625 1.92e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Car07g03385 AP2 9.3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03385 K09286 - gmx:548037 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03385 07 61970492 61971290 Car07g03385 07 61970492 61971290 ECH
Car07g03385 07 61970492 61971290 Car03g01712 03 63006027 63006942 PCT