Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03384 ATGAACACTCATTATTCGAGCACCAATGTGAACTCCCTTGACCAGTTTGAAACTTCCACAACATCCTCTTCAACTCCGGTGGCACCGCCGCCATTCACCCGAAGTTCAAGTTTTCGGAGCCTTTTCTTGGCGGAGAGTTGGGCAGAGCTGCCATTAAAGGAGGACGATACGGACGACATGGTCATCTATGGAGCTTTGAGTGAGGCGGCCGCTACCACCGGTTGGTGCCCCGGTCGGAACAATGTTGATGTAGCGGTAAAAATAGAAGATAAAGGTAAAAAAAGTGGCATTACGGAGGAGCGTGTGGTTGACGCGCCAACAAATAAAAAGTTAGGATATCGTGGTGTGAGGAGAAGGCCTTGGGGAAAATATGCTGCGGAGATAAGAGATCCTAAGAGAAATGGCGCGAGGGTTTGGCTTGGGACTTATGAAACGGCTGAGAATGCAGCTTTGGCTTATGATCAAGCTGCTTTTAAAATGCGCGGCTCCAAAGCCAAGCTAAATTTTCCTCACTTGATTGACTCAGATTATATTAGCCCAACTAAGATTACACGAAAAAAGTGTTAG 567 0.4709 MNTHYSSTNVNSLDQFETSTTSSSTPVAPPPFTRSSSFRSLFLAESWAELPLKEDDTDDMVIYGALSEAAATTGWCPGRNNVDVAVKIEDKGKKSGITEERVVDAPTNKKLGYRGVRRRPWGKYAAEIRDPKRNGARVWLGTYETAENAALAYDQAAFKMRGSKAKLNFPHLIDSDYISPTKITRKKC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03384 188 Pfam AP2 domain 112 162 IPR001471 GO:0003700|GO:0006355
Car07g03384 188 SUPERFAMILY DNA-binding domain 112 171 IPR016177 GO:0003677
Car07g03384 188 MobiDBLite consensus disorder prediction 1 32 - -
Car07g03384 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 15 178 - -
Car07g03384 188 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
Car07g03384 188 PRINTS Ethylene responsive element binding protein signature 152 172 IPR001471 GO:0003700|GO:0006355
Car07g03384 188 ProSiteProfiles AP2/ERF domain profile. 112 170 IPR001471 GO:0003700|GO:0006355
Car07g03384 188 PANTHER DNA-BINDING DOMAIN 15 178 IPR044808 GO:0003700|GO:0009873
Car07g03384 188 CDD AP2 113 172 IPR001471 GO:0003700|GO:0006355
Car07g03384 188 SMART rav1_2 112 176 IPR001471 GO:0003700|GO:0006355
Car07g03384 188 Gene3D AP2/ERF domain 112 171 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03384 Car-Chr7 61961557 61962299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03384 32 187 AP2-EREBP Transcription Factor Family AT2G44840 51.923 1.16e-50 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car07g03384 AP2 4.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03384 K09286 - gmx:100793366 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03384 07 61961557 61962299 Car07g03384 07 61961557 61962299 ECH