Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03371 ATGTCTACGCCGCCGGAATCACTAGTCGATTTTAATCTCTTCCTTCAAGAACAATCATGGCATCTTCTATCGTTACTACTCCAGATCGGTCATCCTGTTGATTCCGAGTATCTATCTTCTCGTTGCCGCTTCTTTATTGCTTCGCCAGATTTCGTCCGTTACGTTGCTTCGCTTCCTGATTCTCCTTTATCCTTTAACAGTAACGGACTCTTAACGCCTTCTGCAAATGCTGTTTATGCAATTGCTAGGTTTTTCTCCTTTCGTTTCCCTGATTCAACTCCGCCTCCTTCCCGAAAACGCAAGTCGTTTTTATCACTTACCGAAGGTGGAAGAGAACCGAAACGACTTGCAATTGGCGATAAAGTTCCAGAGATTTTCACCAAGAGTTTTGATGTTAGTACTGTGGAGGCTGCGATGAGAAGAAATTTCTCTGCAATGAAGTTTGAGTCTCGGATTATGCTTGGTGGTAATTATATGATTCCTATACGTATTGATACAATTGGAGAGTGTTCAGGTTGTTCCAAACCAAATTTTGAATACAGGGAAGCTGATAATGATGCCATAGCAAACCCTGTCCGAGGAGAGATTTCTGGTGCCCTGATCAAAACCAGTGAGAGTTTTTTCATTAGTGAAAGTGACTTGAGGAAGCCTGAGGGTGTAGATAGATTCACGGAGCATAATCCCTCTGAGGATCTTGTTCCAGCAACTATCGTCCAAGATCAATCACTGTGTAATGAGGATGTTGTTGTTGGTATTGAGTCGGGGAAGAAAATGGATTGCTTTGACACATTATTACATGAATATCCTGAGCAAAACATTTCCCATTCTTTGGATGATGATGGTGTTTGTAGAAATAATACCGGCAAAGATCCACTGAGAGAATCAAACCAAAAAAATAAAGAAGTGGAAAGGGGTTCAACGGAAGGATTGGTTAATTATGACAAAGATAGAGAGAAGGAAGATGTTGCTCAGAGGCTCGGTCCTGTAGTATATGAAGAAGAGCCAACGAAAGATTTGGATTTGAAAAAGGGTATGCGTGAACTAGATTTGGGCAAAAACAAGACAGTAAGAAACATGGTGACCCGGTCTACCTACAAAGTCGCTCAGTCTTCAAATCCTAAGCAGCTTCTGAAATCTTCTCGCATATTGAAGGGAGGACAGAAAAATGATATACACTCAAGGACTCAAATTCTAACAGAGTCAATAGCCTGTAACAAATTTGATAATGCTCCAAAAAAAATTGATCAACGTAAAAATGATGAGAACATTATTGCAAAACACAAACTAAAACTAAGTCGTAAAGAAAATGTGGCTGAAAATATCTCCTCGACTTCCAAGGTGGAGAAAAAAGCACTTCCATCTTTTGAAAGTTTTATAATAGAGGAAGAAGAAGGTTCAGGGGGTTATGGAATTGTTTACCGTGCTCAAAGAACTACTGATGGCAAAAGACTTGCTATAAAATGTCCTCATACTAATGCTCATAAAAACCATGTAAATAATGAGCGTAATATGCTGGAGCGTTTTGGGGGTAAAAACTTTATTATAAAGTTTGAAGGTTCTTTCAAAAGTGGCGACAGTGACTGTTTTGTTTTGGAACATGTTGAGCATGAGAGACCTGAGGTTTTGAAAAAAGAAATTGATATCAGTGAACTTCAGTGGTATGGGTTTTGCATGTTCAAGGCACTTGCCTGCTTGCACAAAGAGGGAGTTGTTCACAGAGATGTCAAACCTGGAAACTTCCTTTTCTCTCGAAAGCAAAAGAAAGGCTACCTTATTGACTTCAACCTTGCCATGGATTTAAAGCAGAAGTACAGCATCGGAAGTAAATTGAAACCAAGCCTTGGTGCATCCAATAATATTCCTCTTCCTTCTGGTTCTGCTCCAGTGGTTCAAGACAAGAATCTCGGTGGAATCAAGTCTCTAACATCCAATAAAAGAGAATTGATAGACTATAGGAAATATTCTGAACTTAATAGGCATATGAAGCCAAAGGCTAACACAGGTAATCTGAAAAATTGTCCCGATAAGGCTGTTGCAAATTTACTTAGAGCACAAGGAACAGATGGATCGGGTATAACCTCTGCCAAAGATGTTACTAGCACTAAAACTGCTTCTGCCGATAGGCTCCGagaacccatacctttcaaaggaagaaaggagtatatcaaccttgtgcagaattctatgcaatgtgcaaacaatagttcaatgaaaagcccctcttctcaaaggaaaagggttactgctccttcaggtaaggtagatggcaggacactttatcttacgccaatgcctctacattcatctgcagttgctgtggggttgttaagaagcaaaggggatggaaaacataaaagagagggtccatgtgttggaaccaagggatttcgtgctccggagGTTTTGTTTAGGTCTCAGTTTCAGGGACCGAAGGTTGATATTTGGTCAGCTGGAGTCACACTTCTTTACATGCTGATCGGGAAAACTCCTTTCACTGGCGAACCAGAACAGAGTATAAAAGAAATTGCCAAATTGCGGGGCAGTGAAGAGCTTTGGGAAGTAGCAAAGCTGCATGACCGTGAAGTATCCTTTCCTTTGGAGTTATTTGATGACCGGTACTTGCAATCATATGACATAGAAAGCTGGTGCAAGATTCATACAAAGAGACCTGAGTTTGTAGATCACGCCCCAAAATCATTGTTCGATTTGATAGACAAGTGTCTAAAAGTAAATCCCAGACATAGGATTAGTGTCGAAGAAGTTCTAAGGCATGAGTTTTTTGCCCCATGTAATGATATCATGAGAAAGCAAAGGATGATTCGACGTGGTCTCAGCTCAGACACTGCAGTTTCAAGAGCAGTCTGA 2865 0.3651 MSTPPESLVDFNLFLQEQSWHLLSLLLQIGHPVDSEYLSSRCRFFIASPDFVRYVASLPDSPLSFNSNGLLTPSANAVYAIARFFSFRFPDSTPPPSRKRKSFLSLTEGGREPKRLAIGDKVPEIFTKSFDVSTVEAAMRRNFSAMKFESRIMLGGNYMIPIRIDTIGECSGCSKPNFEYREADNDAIANPVRGEISGALIKTSESFFISESDLRKPEGVDRFTEHNPSEDLVPATIVQDQSLCNEDVVVGIESGKKMDCFDTLLHEYPEQNISHSLDDDGVCRNNTGKDPLRESNQKNKEVERGSTEGLVNYDKDREKEDVAQRLGPVVYEEEPTKDLDLKKGMRELDLGKNKTVRNMVTRSTYKVAQSSNPKQLLKSSRILKGGQKNDIHSRTQILTESIACNKFDNAPKKIDQRKNDENIIAKHKLKLSRKENVAENISSTSKVEKKALPSFESFIIEEEEGSGGYGIVYRAQRTTDGKRLAIKCPHTNAHKNHVNNERNMLERFGGKNFIIKFEGSFKSGDSDCFVLEHVEHERPEVLKKEIDISELQWYGFCMFKALACLHKEGVVHRDVKPGNFLFSRKQKKGYLIDFNLAMDLKQKYSIGSKLKPSLGASNNIPLPSGSAPVVQDKNLGGIKSLTSNKRELIDYRKYSELNRHMKPKANTGNLKNCPDKAVANLLRAQGTDGSGITSAKDVTSTKTASADRLREPIPFKGRKEYINLVQNSMQCANNSSMKSPSSQRKRVTAPSGKVDGRTLYLTPMPLHSSAVAVGLLRSKGDGKHKREGPCVGTKGFRAPEVLFRSQFQGPKVDIWSAGVTLLYMLIGKTPFTGEPEQSIKEIAKLRGSEELWEVAKLHDREVSFPLELFDDRYLQSYDIESWCKIHTKRPEFVDHAPKSLFDLIDKCLKVNPRHRISVEEVLRHEFFAPCNDIMRKQRMIRRGLSSDTAVSRAV 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03371 954 SUPERFAMILY Protein kinase-like (PK-like) 455 942 IPR011009 -
Car07g03371 954 MobiDBLite consensus disorder prediction 732 751 - -
Car07g03371 954 ProSiteProfiles Protein kinase domain profile. 458 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03371 954 Gene3D Transferase(Phosphotransferase) domain 1 430 615 - -
Car07g03371 954 SMART serkin_6 458 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03371 954 Gene3D Transferase(Phosphotransferase) domain 1 771 948 - -
Car07g03371 954 Pfam Protein kinase domain 790 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03371 954 Pfam Protein kinase domain 462 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03371 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Car07g03371 954 MobiDBLite consensus disorder prediction 732 748 - -
Car07g03371 954 PANTHER CELL DIVISION CYCLE 7-RELATED PROTEIN KINASE 437 939 - -
Car07g03371 954 MobiDBLite consensus disorder prediction 277 309 - -
Car07g03371 954 MobiDBLite consensus disorder prediction 282 309 - -
Car07g03371 954 PANTHER CASEIN KINASE-RELATED 437 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03371 Car-Chr7 61753289 61759597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03371 796 928 Core Cell Cycle Gene Families AT1G66750 29.851 6.34e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Car07g03371 Pkinase 2.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03371 K02214 - gmx:100783107 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03371 07 61753289 61759597 Car07g03371 07 61753289 61759597 ECH