Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03366 ATGGAAGGAGAGAGAGATGTTCCCAATTATGAGCTTCAAGTTTCATTCACAAACACTCCACAAGCCATCCATGAAATGGGTTTTGTTCAATTTGAAGAAAATCAAGTTCTTAGCTTCTTGTCACCCTCTACACAATCTCATCAACTTTCTCAATCTCTAAATTCCGGCGGCAGCGGTAGCACTACCACTGCTATCGCTGCAGCCGTCGCAACAACCACGACGGCCGCCGGATTCAACCATAACGATCTTGTCACTAGAACTCCTTGGAATAATGAACAGGTAAGAACTCTAGATCCGAAAGCTGTGAGTGATGAGAATTGCACTGGAAACACTAGTGATGGCAACAACACATGGTGGAGGAGTGGAGGCACAGAGAAGAACAAGGTGAAAGTGAGGAGGAAACTAAGAGAGCCAAGGTTTTGTTTTCAGACAAGAAGTGAGGTGGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTATTATCGGTGCACACACAACAATTGTAGGGTGAAAAAAAGAGTTGAACGACTCTCAGAAGATTGTCGTATGGTGATAACCACTTATGAAGGAAGACACAATCACTCTCCTTGTGACGACTCTAATTCTTCGGAACATGAATGTTTTACATCTTTCTGA 678 0.4292 MEGERDVPNYELQVSFTNTPQAIHEMGFVQFEENQVLSFLSPSTQSHQLSQSLNSGGSGSTTTAIAAAVATTTTAAGFNHNDLVTRTPWNNEQVRTLDPKAVSDENCTGNTSDGNNTWWRSGGTEKNKVKVRRKLREPRFCFQTRSEVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03366 225 SUPERFAMILY WRKY DNA-binding domain 143 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g03366 225 Gene3D WRKY domain 137 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g03366 225 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 12 223 - -
Car07g03366 225 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 223 IPR044810 GO:0003700
Car07g03366 225 MobiDBLite consensus disorder prediction 102 121 - -
Car07g03366 225 Pfam WRKY DNA -binding domain 152 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g03366 225 ProSiteProfiles WRKY domain profile. 146 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g03366 225 SMART WRKY_cls 151 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03366 Car-Chr7 61707308 61711850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03366 3 225 WRKY Transcription Factor Family AT2G44745 58.009 1.80e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car07g03366 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03366 - - var:108347245 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03366 07 61707308 61711850 Car07g03366 07 61707308 61711850 ECH