Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03339 ATGTCCTTCAATCAATCAATAACCGAAAAGAACGACGCCGTTTATAAGAAATCTGGGCGATCGTCTAGCTTCAATCAGCAGAGAGGTTCCTTAGGCGCCTATGGAAGGGGGGGAGGCGGCGGTGCCGCTCCGTCGATCAACTCTTCCAAGAGTTTTAACAAGAAGTCTACACACGGTGGGCAATATAGGGTGAACCTTTCCCCAGTGAATTCATCAGAGTTGAACAGTGCTTCTGCTGCTCAAACCATACATAATGGTACTCATGTACAACCCCAATTGCATGGTGCTGCACAACGAAGCCCTAGAGCTGTTAAAAAAGAACTAACTTCTCAACCGCCCTCCGTGAGCACTGATATGACCACTCCTACAAGCCCCGCTAAGGGAGATGCATCTAAGGCATTCCCTGTTCAGTTTGGATCAATTGTTCCTAGCTTTATTAATGGGGTGGCTATTCCTGCTCGTACAAGCTCAGCTCCACCTAATTTAGATGAGCAGGAGCGCAATCAGGCACATCATGACTCTTTTAGACCCGTGCCTTCAGGGCCAGTACCTCCTGCTCCAAAGCAGCAGCTAGCACCTAGGAAAGATGCAGTTGTAACCGAGCAATCTAATGCTGGGGACACTCGTATAGGGGCTAAGGCTAAAAAGAATACTCAGGTGCCAGCTTTGACCTCGGCAAGCCAGATGCAGAAGCCTTCTGTTGTTCCAGTAACTGGGATTTCAATGGCCACACCATTTCAGCAGTCACATGCATCTTTACAGTTTGGTGGTCCTAATCTACAGATTCAGTCTCAGTGTATGTCACCGGCATCCCGCCAGATTCCTATACCAATGCCCATACCGATTGGAAATGTTGCACCAATGCCACAGCCGGTTTTTGTTCCAGGTCTTCAGCCTCATCCAATGCACCCTCAGGGGATCATGCATTCAGGTCATAATATAAGTTTCACTCATCAAATGAGTCATCAGTTACCCCATCAATTGGGTAACATGGGCATTGGCATCAGTCCTCAATATCCCCAGCAGCAGGGTGGAAAGTTTGCCAGTCCTCGAAGAACTACTCCTGTCAAGATAACTCATCCTGAAACGCATGAAGAGCTGAGGCTTGATAAAAGGGCAGATGGATATTCAGATGGTGGGTCATCTGGTGCTAGGTCTCATCCTAATGTACCTTCTCAATCCCAACCTGTCAAATCCTTTGTTGCTTCTCAGCCTATGAATTATTATCCTTCCAACACATATTATCAACCTTCTAGTTCTCTTCCACTAACAAGTAGCCAAATAACACCCAATGCTCAGCCCCCAATATTTAATTATCCTGTGAACCACGGTCCCCAAAATGTGGCTTTCATGAATTCATCGTCTCTAAGTTCTCTGCCTGTTAATAAAGTCAGCACTCCTATTCCTGGCATTGACGAACCCCCCACTGCCGAACGTCCTCGTGAAGTGCCTAATGTGATGTCATCAGCTGTGACTGTGGATTCTGTTTCAGTTGTGTCTAATAATGAAGACAGGATGAGGGAATCTCTTAGTATTTCCAACTCTTTGAAGGATAATCAGAAGAAACCTGTGATAAAAGTGCCTAATGTGATGTCATCAGCTGTGACTGTGGATTCTGTTTCAGTTGTGTCTAATAATGAAGACAGGATGAGGGAATCTCTTAGTATTTCCAACTCTTTGAAGGATAATCAGAAGAAACCTGTGATAAAAGGTCAATCATCTCAAAATCAGGTCTCTGTGCAATCTCCTACAGTGAATAATATGCTGTCTCGAGCTGTTGACAGTGGTATATCTGATACTGGGGTTTCCACACCAGTAGGAAGTGAAACAAAACATTCTCCTGCAATTATCATTGAAGATTTTCTCATATCTAAAGGATCTATTGCTCAAGCTGTTGATAGTTTTAATAATCATAAGCACAACAAGATAGATGAATCATCTGAAGCAGATATGCAGTCTGTCGATTTAGCAGAAACAACAGCAAAGGAAATTAATGATAGTGCAGAGAATGCTTTCAGTGACTCAATGTCAGGTACCAAAGATAGACCTAATTTAGAGCCGAATAAGGCGAAAACTACATCTAAAGGGAAGAAGAAAAGAAAAGAGACTCTCCAGAAAGCAGATGCTGCTGGTTCAACTTCTGACCTTTATAATGCATATAAAGGACCTGAGGAAAAGAAAGAATCTGTCTTAATTTCAGAGAGCACAGAAAGTGCATCTATGTTTGAAGGTTTAAAGCAGTTATCTGCAGCTTCTGCTAAATCAGATGCTACAGGAGGTGAGAAATGTAGTCACAGTAAAGCTGAACCTGATGACTGGGAGGATGCAGCTGACATGTCTACATCAAAACTTCAAGTCGATGATAAATCTCCACAGGTTATTGATGGAAGTGGAAGTACAGAAAAAAAGTACTCACGTGATTTCCTTTTGAAATTCGCAGAGCAATGCATTTCTCTTCCTGAAGGTTTTGAAATTACGACAGACATAGCTGAGGCTTTGATGAGTGCCAATATTAGTAATTCTCACGATTCACATCCTAGTTCTGGAAGAATTGTAGACAGGACAAGGATGGAACGTCGTGGGAATGTTGTGGCTGAGGAAGACAGATGGAGTAAAGTTTCCAGTTCTTTTCATCCTGGGCGTGGTTTGGATGGTATTGGAGCTAATGGCGGATTCAGACATGGCCCAGGAGGCAATTTTGGTGTTTTAAGGAATCCTCGTGCACAGGCATCCATCCAATGTGCTGGGGGAATCCTTTCTGGGCCAATGCAATCTGTGGGAAATCAGAGTGGAATGCAAAGAAATAGCCCTGACGGGGAGAGGTGGCAGCGTTTTGCTAGCTTCCAGCAGAGAGGTTTAATTCCTTCTCCTCAGTCTCCAGTACAGATGATGCACAGGGCTGAGAAGAAGTACGAAATAGGCAAAGTCTCAGATGAGGAAGAGGCAAAGCAGAGGCAACTGAAAGCTATATTAAACAAACTAACTCCTCAGAATTTTGATAGACTTTTTGAACAGGTAAAAACAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTCGAGAAGGCTCTGACGGAGCCTACCTTCTGTGAAATGTATGCAAACTTCTGTTCACATTTGGCTTCTGAGTTGCCTGATTTAAGTGAGGGCAATGAAAAGATAACTTTTAAAAGGTTATTATTAAACAAATGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAACAAGAAGAGGCAAATAAGGTTGATGAGGGCGAGGTCAAACAATCAGATGAAGAAAGGGAACAGAGAAAAACCAAGGCAAGAAGACGCATGTTAGGAAACATCAGATTGATCGGAGAACTGTATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAATTACTTGGTCAAGTTCAGGATCCGGATGAGGAAGATGTTGAAGCTTTATGCAAGCTGATGAGTACTATTGGGGACATGATTGACCATCCCAAAGCCAAGGAACATATGGATGTATATTTTGAAAGGTTGAAAATCTTATCAAACAACATGAATTTATCTTCTAGGTTGAGGTTTATGTTGAAGGATGTTATTGATTTGAGAAAGAATAGATGGCAACAGAGGAGGAAAATTGATGGTCCAAAGAAGATTGAGGAGGTACACAGAGATGCTGTGCAAGAGAGGCAGGCTCAAGCTGGAAGGCTGGGCCGTGGTATGGGAAACAATCAATCTGCAAGGAGGAGCCCCATGGATTTTAATCCTAGAGGATCACCTACGCTGTCTCCCAATGCTCAGATAGGTGGACCGCGTGGGCTGCCTACTCAAGCACATGGAATTGGGTCTCAGGATGCTCATTTTGAAGAAAGGCAATCTTATGAGCCTAGGACCTTGTTGGTTAATTTGCCTCAAAGACCCTTGGGTAATGATTCTATAACATTGGTACCCCAAGGTGGTCTTGCTAGGGGAATGTCCATTAGAGGAGCAATTTCTAATTTATCAATACCTGATGTGCATTTTGTCCCTGGAGATTCTCACAGAATGCCTACTGATCTTAATGGTTATAACAATTTATCTGAGCGCACACCGTATGACTCAAGGGAGGATATTGCATCAAGATATATTTCAGATAGATCTTCAAGTCTAGCTGGTTATGATCATTCAAGTGCTCCAGTGCATAATATAAACTATGATAACAGAGACTTAAGGAATCATGATCGGAATCTAGACAGTCCTGTTGCAACTTCGCCTCACGCTCATTTGCATGGGCCGATAGTTTCCCAGAATGCTTCTTCAGAGAAGGTTTGGCCAGAGGAACGACTCCGGGACATGTCCTTGTCGGCAATCAGAGAATACTACAGTGCTAGAGATGAAAATGAAGTTGTTGAATGTGTTAAAGATTTGAACTCTCCAAGCTTTCATCCTTCCATGGTTTCTCTCTGGGTCACAGACTCATTTGAGAGGAAGGACGCTGAACAAAATCTTTTAGGCAAACTGCTTGTCAAACTTGTGAAATATCAGGATGGCCTCTTGAGTCAAACTCAGCTTATCGAAGGGTTTGAGACTGTTCTCAGTACATTGGAGGATGCAGTTAATGATGCCCCCAAGGCACCCGAGTTTCTTGGCCGTATTTTTGCAGAAATTATAACAGAGAGTTTAGTCAGTTTGAATGAAATTGGGAAGTTAATACATGATGGTGGAGAGGAGCCAGGTAGTCTCTTAGAAGTTGGACTTGCAGCTGATATTCTTGGAAGCACCCTGGAAGTAATACAGCATGAGAAAGGGGACAGCGTTCTTAGTGAAATTCGCGCGAGCTCTAACTTGCGGTTGGAGTCTTTCCGACCACCTAATTCTATTACATCAAAGAAGTTGGAGAAATTTATTTAG 4890 0.4311 MSFNQSITEKNDAVYKKSGRSSSFNQQRGSLGAYGRGGGGGAAPSINSSKSFNKKSTHGGQYRVNLSPVNSSELNSASAAQTIHNGTHVQPQLHGAAQRSPRAVKKELTSQPPSVSTDMTTPTSPAKGDASKAFPVQFGSIVPSFINGVAIPARTSSAPPNLDEQERNQAHHDSFRPVPSGPVPPAPKQQLAPRKDAVVTEQSNAGDTRIGAKAKKNTQVPALTSASQMQKPSVVPVTGISMATPFQQSHASLQFGGPNLQIQSQCMSPASRQIPIPMPIPIGNVAPMPQPVFVPGLQPHPMHPQGIMHSGHNISFTHQMSHQLPHQLGNMGIGISPQYPQQQGGKFASPRRTTPVKITHPETHEELRLDKRADGYSDGGSSGARSHPNVPSQSQPVKSFVASQPMNYYPSNTYYQPSSSLPLTSSQITPNAQPPIFNYPVNHGPQNVAFMNSSSLSSLPVNKVSTPIPGIDEPPTAERPREVPNVMSSAVTVDSVSVVSNNEDRMRESLSISNSLKDNQKKPVIKVPNVMSSAVTVDSVSVVSNNEDRMRESLSISNSLKDNQKKPVIKGQSSQNQVSVQSPTVNNMLSRAVDSGISDTGVSTPVGSETKHSPAIIIEDFLISKGSIAQAVDSFNNHKHNKIDESSEADMQSVDLAETTAKEINDSAENAFSDSMSGTKDRPNLEPNKAKTTSKGKKKRKETLQKADAAGSTSDLYNAYKGPEEKKESVLISESTESASMFEGLKQLSAASAKSDATGGEKCSHSKAEPDDWEDAADMSTSKLQVDDKSPQVIDGSGSTEKKYSRDFLLKFAEQCISLPEGFEITTDIAEALMSANISNSHDSHPSSGRIVDRTRMERRGNVVAEEDRWSKVSSSFHPGRGLDGIGANGGFRHGPGGNFGVLRNPRAQASIQCAGGILSGPMQSVGNQSGMQRNSPDGERWQRFASFQQRGLIPSPQSPVQMMHRAEKKYEIGKVSDEEEAKQRQLKAILNKLTPQNFDRLFEQVKTVNIDNAVTLTGVISQIFEKALTEPTFCEMYANFCSHLASELPDLSEGNEKITFKRLLLNKCQEEFERGEREQEEANKVDEGEVKQSDEEREQRKTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQVQDPDEEDVEALCKLMSTIGDMIDHPKAKEHMDVYFERLKILSNNMNLSSRLRFMLKDVIDLRKNRWQQRRKIDGPKKIEEVHRDAVQERQAQAGRLGRGMGNNQSARRSPMDFNPRGSPTLSPNAQIGGPRGLPTQAHGIGSQDAHFEERQSYEPRTLLVNLPQRPLGNDSITLVPQGGLARGMSIRGAISNLSIPDVHFVPGDSHRMPTDLNGYNNLSERTPYDSREDIASRYISDRSSSLAGYDHSSAPVHNINYDNRDLRNHDRNLDSPVATSPHAHLHGPIVSQNASSEKVWPEERLRDMSLSAIREYYSARDENEVVECVKDLNSPSFHPSMVSLWVTDSFERKDAEQNLLGKLLVKLVKYQDGLLSQTQLIEGFETVLSTLEDAVNDAPKAPEFLGRIFAEIITESLVSLNEIGKLIHDGGEEPGSLLEVGLAADILGSTLEVIQHEKGDSVLSEIRASSNLRLESFRPPNSITSKKLEKFI 1629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03339 1629 MobiDBLite consensus disorder prediction 1 131 - -
Car07g03339 1629 MobiDBLite consensus disorder prediction 1238 1266 - -
Car07g03339 1629 Gene3D - 1435 1629 - -
Car07g03339 1629 Gene3D - 984 1219 - -
Car07g03339 1629 MobiDBLite consensus disorder prediction 155 227 - -
Car07g03339 1629 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 97 494 IPR045208 GO:0003743
Car07g03339 1629 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 677 1619 IPR045208 GO:0003743
Car07g03339 1629 MobiDBLite consensus disorder prediction 357 375 - -
Car07g03339 1629 MobiDBLite consensus disorder prediction 555 580 - -
Car07g03339 1629 ProSiteProfiles MI domain profile. 1441 1565 IPR003891 -
Car07g03339 1629 SMART ma3_7 1442 1556 IPR003891 -
Car07g03339 1629 SMART if4_15 984 1206 IPR003890 GO:0003723|GO:0005515
Car07g03339 1629 MobiDBLite consensus disorder prediction 667 682 - -
Car07g03339 1629 MobiDBLite consensus disorder prediction 1076 1104 - -
Car07g03339 1629 MobiDBLite consensus disorder prediction 44 94 - -
Car07g03339 1629 MobiDBLite consensus disorder prediction 104 127 - -
Car07g03339 1629 SUPERFAMILY ARM repeat 977 1208 IPR016024 -
Car07g03339 1629 MobiDBLite consensus disorder prediction 340 397 - -
Car07g03339 1629 MobiDBLite consensus disorder prediction 1 30 - -
Car07g03339 1629 Pfam MA3 domain 1447 1552 IPR003891 -
Car07g03339 1629 MobiDBLite consensus disorder prediction 783 799 - -
Car07g03339 1629 Coils Coil 1066 1086 - -
Car07g03339 1629 MobiDBLite consensus disorder prediction 382 397 - -
Car07g03339 1629 MobiDBLite consensus disorder prediction 752 799 - -
Car07g03339 1629 MobiDBLite consensus disorder prediction 760 782 - -
Car07g03339 1629 Pfam MIF4G domain 984 1205 IPR003890 GO:0003723|GO:0005515
Car07g03339 1629 SUPERFAMILY ARM repeat 1437 1624 IPR016024 -
Car07g03339 1629 MobiDBLite consensus disorder prediction 667 733 - -
Car07g03339 1629 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 97 494 - -
Car07g03339 1629 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 677 1619 - -
Car07g03339 1629 MobiDBLite consensus disorder prediction 1228 1289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03339 Car-Chr7 61402272 61428568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03339 692 1628 Eukaryotic Initiation Factors Gene Family AT3G60240 56.354 0.0 975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03339 K03260 - gmx:100819084 2113.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03339 07 61402272 61428568 Car07g03339 07 61402272 61428568 ECH
Car07g03339 07 61402272 61428568 Car03g00900 03 47982790 48030087 PCT