Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03322 ATGCACACAACAACACTCTCTTTCAAAGCTTTCATTCTTTTAAGCCATAACGAAATGTTTAACAACGTCGTCGTTTCGCACACGTTCGCAACTGTTTCTAAATCACTAACGGAAACGGTTACACCACCGTCACCTCACAGCTCATCTCCGTTACAGAATATAAGTCCCAGCATTCTCATCATTGTTACGGTTCTCGCCGTCACCGTTATTGTTTCATTCGCGCTCTGTTTCCTTCTCCGTCATCTCAACCGTCGATGTCTCCGTCGTCTCTCCTCCGATCCCGACGCTTTCCCGCCGCCGGTTGTCATCAGCGGTCGAACCTCACCGGAAATAATACCTCCCTCTGATTTGATTGATTCGCTTCCGCTTTTCACTTTCTCCTCCGTAACTCGCCGTTCATCCACAGCCGCCGCTGACTGCGCCGTTTGTCTCTCGAAGTTCCACAACAACGATCTCCTCCGTCTTCTCCCTCGCTGCTGCCATGCTTTCCACGTCGACTGCATTGATACGTGGCTTCGTTCAAATCTCTCGTGTCCTCTCTGTCGCTCCGCCGTTTTCCCCTCCGATTCAGACCTCGCTAAAATTCTCAGATCACCGTCCTCCGATAGTTTTCGAATCGAAATAGGAAATGTGAGCCGCCGAGGAACTATTCCCGACGCCGCCGGTGATGGAAGGTCGTTTTCCATGGGATCATTCGATTATTACGTGGAGGAGCCATCGGAGGTTTCGTTCACTCATGATCACCGGAGAAGTATCTCCGATCATAAGGTCGACATTCCGACATCAGATGATTCTCCGGCGATAAACGAAACCGTTGTACTTGCCGGAGAAGTTGGCAGTAGTGGATTCTGGCTGAAGGATTACGTGGACAGACTTTCGGCTTCTATTTCATCTCGAACGGCGTCGTTTAGAAGTTCTGGAAGGTTCTTTGGTGGAAGTAGTCGCAGAAACGACGTCGTTCAAGTAGCTGTGGATTATGATGACGTGGAAAGTAACAGAATTGGTGAGGAAATTACCGAAATGTTTCGTTGGCTTTCAGGGGTATGA 1047 0.4928 MHTTTLSFKAFILLSHNEMFNNVVVSHTFATVSKSLTETVTPPSPHSSSPLQNISPSILIIVTVLAVTVIVSFALCFLLRHLNRRCLRRLSSDPDAFPPPVVISGRTSPEIIPPSDLIDSLPLFTFSSVTRRSSTAAADCAVCLSKFHNNDLLRLLPRCCHAFHVDCIDTWLRSNLSCPLCRSAVFPSDSDLAKILRSPSSDSFRIEIGNVSRRGTIPDAAGDGRSFSMGSFDYYVEEPSEVSFTHDHRRSISDHKVDIPTSDDSPAINETVVLAGEVGSSGFWLKDYVDRLSASISSRTASFRSSGRFFGGSSRRNDVVQVAVDYDDVESNRIGEEITEMFRWLSGV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03322 348 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 189 IPR013083 -
Car07g03322 348 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 38 320 - -
Car07g03322 348 Pfam Ring finger domain 139 182 IPR001841 -
Car07g03322 348 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL4 38 320 - -
Car07g03322 348 SUPERFAMILY RING/U-box 117 188 - -
Car07g03322 348 SMART ring_2 140 181 IPR001841 -
Car07g03322 348 CDD RING-H2_PA-TM-RING 139 182 - -
Car07g03322 348 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03322 Car-Chr7 61068144 61069559 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03322 35 185 C3H Transcription Factor Family AT4G28890 35.669 2.40e-23 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03322 K10663 - gmx:100776516 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03322 07 61068144 61069559 Car07g03322 07 61068144 61069559 ECH