Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03310 ATGGCTTTGGAGAACTTCTACAACCTTTTATCTGATGCAACAAAAGAACTAAGAAGCATGTCTTGGACAACATGGCAGCCATTATTCTCACCATGCTTATTGGAACACATAATTTTACCTCTAGAATTTGGCTTCCTTGCAATATTCTTAGTCCAACTTCTAAGAAAATGCATGAACCAGATCACCATGCAAAACAAAGTCTCAGAAGTTCATCCAAATGCAACAAAATTTGGCCTTGCTTACAAAATCAGCTTAATTTGCACCTCTATATTGTTGGCTATTCATGCCTTAATGCTATCATTGATGTTCAATCATGAGCCTCAGTGTAACTCTAAACTTGAATCATATACATCAGAGATAGTTCAAGTGTTATCATGGACAATTAGTCTTATAGCAATATTCAAGATGTCAAAATCAAATTCTCATTTTCCTTGGGTTCTAAGATCTTGGTGGATTTTCACATTCCTTTTGAGCATTATAAGCACACCAATTCATGTTCATTTTAGTATCAGAAACAAGGGTATGATTGGTATAAAAGAATATGCAGATTTCATTGGTTTGATTGCTTCAACATGTCTTTTTGTTATTTCAACAAGAGGGAAAACAGGAATTGTTATCATCATTGACACAAATGGAACTATATCAGAACCACTTTTGGGAGAGAAAAATGAGAAAAAACAACATTGTGAGTTTTCAAAAGAATCACCATATGGAAAAGCTACACTTTTTCAACTCATTAACTTCTCATGGCTCAATCCATTGTTTGCAGTAGGGTATAGAAAACCTATTCAATTGGATGATATACCTGATCTTGACATAAAGGACTCTGCTGAATATCTAAACTGTTCATTTGATGAGAGTCTTAGACAAGTTAAGGAGAAAGATGGAACTTCAAATCCATCTATCTACAAAGCAATCTATTTATTTGCTAGGAAGAAAGCAGCAATCAATGCGCTTTTCGCGATCATATGCGCTTCGGCTTCTTATGTTGGTCCTTATTTGATCACTGACTTTGTGAACTTCCTTGCGGAGAAAGATACCCGCGGAGTAAAGAGCGGATACCTTTTGTCATTAGGCTTCTTATGTGCCAAAATGGTCGAAACCATAACTCAAAGGCAATGGATTTTCGGTGCTCGGCAATTAGGCCTCCGCCTTAGAGCAGCATTGATATCACATATTTATAAGAAGGGCTTACATTTGTCTAGCAGATCGCGTCAGAGTCATTCCGGTGGTGAGATTATGAACTATATGAGCGTCGATGTGCAGCGAATTACGGATTTTGTTTGGTATGTAAATGTAATATGGATGCTGCCAATACAAATTTCATTAGCTGTTATCATTTTGCATACAAATCTTGGATTAGGTTCATTGGCTGCATTAGCTGCTACACTAGCAGTTATGGCATTGAACATACCTTTAACAAATATACAAAAAAGGTACCAAACAAAGATCATGGATGCAAAAGACAACAGAATGAAAGCAACTTCAGAAGTTCTAAGAAACATGAGGACTTTGAAACTTCAAGCATGGGATAGTACATTTTTCCAAAGGATAGAAGCATTGAGAAGTGTAGAATATAGTTGGTTAATGAAGTCGTTAAGACAAGCAGCATTTTCGGCTTTTATCTTTTGGGGTTCACCTACATTCATTTCAGTGATAACTTTTTGGGCATGTATGTTCATGGGAATTGAACTAACAGCCGGAAGGGTCTTATCAGCGTTCGCGACGTTTCGAATGTTGCAGGATCCTATTTTTAGTCTACCTGATTTACTCAATGTCATTGCTCAAGGAAAAGTTTCGGTCGATAGGATCGCTTCTTTTCTTAAGAAGGAAGAAATCCAACATGATGTCATTGAATATGTTGCAAAGGAAAAAACCGAATTTGACGTTGTTATTGAGAAAGGAAGATTCAGCTGGGATCCTGAGGAAACAAGAAGTCCAACACTTGATGAAATTGAGTTGAAAGTTAAGAGAGGAATGAAGGTGGCAATTTGCGGTTCGGTTGGTTCGGGGAAATCTAGTATGCTCTCAGGGATTTTGGGAGAAATATTTAAACAATCAGGGAGTGTAAAGATTAGTGGAACAAAGGCTTATGTTCCACAATCAGCATGGATACTTACTGGAAATATTAGAGACAATATAACTTTTGGAAAAGAGTTCAATGATGAAAAGTATGAGAAAACTGTTGAAGCCTGTGCATTGAAAAAGGACTTTGAGCTATTCTCATGTGGTGACATGACAGAGATTGGAGAAAGAGGGATTAATATGAGTGGAGGACAGAAACAAAGAATTCAGATAGCTAGAGCTGTTTATCAGGATGCTGATATATACCTTTTTGATGATCCTTTCAGTGCTGTGGATGCTCATACTGGCACTCACCTCTTTAAGGAATGTCTTCTGGGGATTCTCAAAGAGAAAACTATAATTTTTGTTACACACCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATATTGGTGATGCAAAATGGAAGGATAGCACAAGCTGGAACATTTGAAGAACTTCTAAAGCAAAATATAGGATTTGAAGTATTAGTTGGTGCACATAGCAAAGCACTAGAGTCAGTTCTTATGGTTGGAAATCCAAGTAGAACAAATTTAAATCCAATACCTGAAGGGGAATCAATTACCTACTCAAACTCAAGTTCTGAACTTTTGCACACACAGCTTGACACAGTGCAAGATAACCATCCTTCAGATAGCAAAGGAAATGATGGAAAATTGGTTCAAGAAGAAGAAAGAGAAACAGGAAGCATATCAAAAGAAGTTTACTGGTCTTATTTGACAACTGTTAAAGGAGGACTTCTTGTTCCAATCATAATATTGGCACAATCTTCATTCCAAATACTTCAGATTGCAAGTAACTATTGGATGGCTTGGGTTTGTCCTACAAAAGCTGATGCTAAGCCTATATTTGATATGAATTTCATACTTCTTATTTATATGCTACTGTCTGTTGCTGGTTCACTTTGTGTTCTGCTGAGAGCCATGTTGGTGTTAAATGTTGGACTTTGGACAGCACAGAGTTTTTTCACAAGAATGTTGCATAATGTGCAAAGAGCCCCCATGTCATTTTTTGATTCAACCCCAACTGGAAGAATCTTGAACAGGGCCTCCACAGATCAAAGTGTGCTAGACATGGAAATGGCAAACAAAATAGGATGGTGTGCTTTCTCAGTAATACAAATTCTAGGCACTATTGCAGTGATGTGTCAGGCAGCATGGCAAGTATTTCTCATCTTCATTCCAGTAACTGGAGTCTGCATATGGTACCAACGATATTATAATCCAACAGCAAGAGAACTGGCTCGCTTAGCACAGATACAAATTACTCCAATTCTCCACCATTTTTCAGAATCTTTAGCAGGAGCTGCATCAATACGAGCTTTTGATCAAGAAGGCCGTTTCATGCGCACAAATCTTGTCCTTTTGGATGGCTTCTCAAGACCATGGTTTCATAATGTGTCTGCAATGGAATGGCTTTCTTACAGATTGAATTTGCTTTCAAATTTTGTTTTTGCCTTTTCACTGGTCTTGCTAGTGAGCCTCCCTGAAGGATTCATCAATCCAAGCATTGCAGGGTTGGCAGTAACATATGGAATCAATCTTAATGTCTTGCAAGCTTCAGTTATATGGAACATTTGCAATGCAGAAAACAAAATGATATCAGTTGAAAGAATTCTTCAATATACAAATATAGCAAGTGAATCACCTCTTGTGATTGAAGGCAGTCGTCCGCCAAGAAACTGGCCAGAAACTGGAACAATATGTTTCCAAAATTTGCAGATACGTTACGCTGAACATCTTCCATCTGTGTTGAAAAATATTACTTGCACATTTCCTGGAAGAAAGAAAATCGGTGTTGTAGGACGAACTGGCAGTGGAAAATCAACCCTCATACAGGCAATTTTCAGGGTTGTTGAACCAAGAGAGGGATGCATTATGATTGACAACGTGGACATATGTGAGATAGGTCTACATGACTTAAGGGCAAGGCTCAGCATTATACCACAGGATCCAGCCTTGTTTGAGGGCACAGTTAGAGCAAACCTGGATCCTCTGGAGCAATACTCTGACATTGAAGTGTGGGAGGCTCTAGATAAATGTCAGCTAGGTCACCTAGTGAGGGCCAAAGAAGAGAAGTTGGACTCCCCAGTGGTTGAAAATGGTGATAACTGGAGTGCTGGACAAAGACAACTATTTTGCCTTGGAAGAGCCTTGTTGAAGAAAAGTAGCATATTAGTACTAGATGAAGCAACGGCCTCTGTGGATTCTGCAACTGATGGGGTGATACAGGATATCATCTGTCAAGAGTTCAAAGATCGAACAGTTGTGACAATAGCTCATCGAATCCACACAGTTATTGATAGCGACTTGGTATTGGTTCTCAGTGATGGGAGAATTGCAGAATATGATGAACCATCAAAGTTACTTGAAAGAGAAGATTCCTTCTTCTACAAACTTATAAAGGAGTACTCTAGCAGATCCCATAGTTTCAACAGCTTGGCAACTCAACATGTCCAAGACAGGGAATAA 4554 0.3843 MALENFYNLLSDATKELRSMSWTTWQPLFSPCLLEHIILPLEFGFLAIFLVQLLRKCMNQITMQNKVSEVHPNATKFGLAYKISLICTSILLAIHALMLSLMFNHEPQCNSKLESYTSEIVQVLSWTISLIAIFKMSKSNSHFPWVLRSWWIFTFLLSIISTPIHVHFSIRNKGMIGIKEYADFIGLIASTCLFVISTRGKTGIVIIIDTNGTISEPLLGEKNEKKQHCEFSKESPYGKATLFQLINFSWLNPLFAVGYRKPIQLDDIPDLDIKDSAEYLNCSFDESLRQVKEKDGTSNPSIYKAIYLFARKKAAINALFAIICASASYVGPYLITDFVNFLAEKDTRGVKSGYLLSLGFLCAKMVETITQRQWIFGARQLGLRLRAALISHIYKKGLHLSSRSRQSHSGGEIMNYMSVDVQRITDFVWYVNVIWMLPIQISLAVIILHTNLGLGSLAALAATLAVMALNIPLTNIQKRYQTKIMDAKDNRMKATSEVLRNMRTLKLQAWDSTFFQRIEALRSVEYSWLMKSLRQAAFSAFIFWGSPTFISVITFWACMFMGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLKKEEIQHDVIEYVAKEKTEFDVVIEKGRFSWDPEETRSPTLDEIELKVKRGMKVAICGSVGSGKSSMLSGILGEIFKQSGSVKISGTKAYVPQSAWILTGNIRDNITFGKEFNDEKYEKTVEACALKKDFELFSCGDMTEIGERGINMSGGQKQRIQIARAVYQDADIYLFDDPFSAVDAHTGTHLFKECLLGILKEKTIIFVTHQVEFLPAADLILVMQNGRIAQAGTFEELLKQNIGFEVLVGAHSKALESVLMVGNPSRTNLNPIPEGESITYSNSSSELLHTQLDTVQDNHPSDSKGNDGKLVQEEERETGSISKEVYWSYLTTVKGGLLVPIIILAQSSFQILQIASNYWMAWVCPTKADAKPIFDMNFILLIYMLLSVAGSLCVLLRAMLVLNVGLWTAQSFFTRMLHNVQRAPMSFFDSTPTGRILNRASTDQSVLDMEMANKIGWCAFSVIQILGTIAVMCQAAWQVFLIFIPVTGVCIWYQRYYNPTARELARLAQIQITPILHHFSESLAGAASIRAFDQEGRFMRTNLVLLDGFSRPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVSLPEGFINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTNIASESPLVIEGSRPPRNWPETGTICFQNLQIRYAEHLPSVLKNITCTFPGRKKIGVVGRTGSGKSTLIQAIFRVVEPREGCIMIDNVDICEIGLHDLRARLSIIPQDPALFEGTVRANLDPLEQYSDIEVWEALDKCQLGHLVRAKEEKLDSPVVENGDNWSAGQRQLFCLGRALLKKSSILVLDEATASVDSATDGVIQDIICQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSKLLEREDSFFYKLIKEYSSRSHSFNSLATQHVQDRE 1517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03310 1517 MobiDBLite consensus disorder prediction 898 920 - -
Car07g03310 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1253 1494 IPR027417 -
Car07g03310 1517 MobiDBLite consensus disorder prediction 904 920 - -
Car07g03310 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 625 847 IPR027417 -
Car07g03310 1517 PANTHER - 89 1507 - -
Car07g03310 1517 Pfam ABC transporter transmembrane region 316 579 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g03310 1517 Pfam ABC transporter transmembrane region 954 1189 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g03310 1517 Gene3D - 1246 1498 IPR027417 -
Car07g03310 1517 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 315 596 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g03310 1517 SUPERFAMILY ABC transporter transmembrane region 931 1242 IPR036640 GO:0005524|GO:0016021
Car07g03310 1517 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1262 1496 IPR003439 GO:0005524
Car07g03310 1517 ProSitePatterns ABC transporters family signature. 756 770 IPR017871 GO:0005524
Car07g03310 1517 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 945 1225 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g03310 1517 CDD ABC_6TM_ABCC_D2 943 1237 IPR044726 GO:0140359
Car07g03310 1517 Pfam ABC transporter 649 783 IPR003439 GO:0005524
Car07g03310 1517 Pfam ABC transporter 1279 1427 IPR003439 GO:0005524
Car07g03310 1517 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 89 1507 - -
Car07g03310 1517 SMART AAA_5 1288 1480 IPR003593 -
Car07g03310 1517 SMART AAA_5 658 831 IPR003593 -
Car07g03310 1517 CDD ABCC_MRP_domain1 630 831 - -
Car07g03310 1517 Gene3D - 625 857 IPR027417 -
Car07g03310 1517 CDD ABCC_MRP_domain2 1260 1480 - -
Car07g03310 1517 CDD ABC_6TM_ABCC_D1 316 604 IPR044746 GO:0140359
Car07g03310 1517 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 854 IPR003439 GO:0005524
Car07g03310 1517 SUPERFAMILY ABC transporter transmembrane region 311 612 IPR036640 GO:0005524|GO:0016021
Car07g03310 1517 Gene3D ABC transporter type 1, transmembrane domain 907 1243 IPR036640 GO:0005524|GO:0016021
Car07g03310 1517 Gene3D ABC transporter type 1, transmembrane domain 286 613 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03310 Car-Chr7 60878818 60890143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03310 618 883 Calmodulin-binding Proteins AT2G36910 28.223 4.76e-21 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03310 - - gmx:100817486 2528.82