Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03297 ATGGATAGCAACATGAACACTCAACTATCTAATGATATGGATACTATAAACAATGACAAAGTGTTTAGTATATTACCACCGGGTTACAAATTCTGCCCTAATGATGTTGAGTTAATCGATTATTATTTAAAGCTAAAGTTGGCCGGTGATCCCATCAATTCATCAAGGTTCTATGAAGTTGATGTTTACAAATATTCTCCTCAAGAACTAGATTTTCTAGTTGGTATCATAGATGGGGAAGGTTGGCCGGGGACAGGAGTAATAGGGCTGGTGGAAGCACCAGAATTGGGCAAAATGGCAGGGCTAGAGGATGGTATGATACTGTCCAAAGGAGTCCCTATGGTGGGTGACTCAGCTGAAGTAGAAATAGGAGATTGGACAAGCATATCATTATTGTCAGGGGTGTGA 408 0.4044 MDSNMNTQLSNDMDTINNDKVFSILPPGYKFCPNDVELIDYYLKLKLAGDPINSSRFYEVDVYKYSPQELDFLVGIIDGEGWPGTGVIGLVEAPELGKMAGLEDGMILSKGVPMVGDSAEVEIGDWTSISLLSGV 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03297 135 SUPERFAMILY NAC domain 17 79 IPR036093 GO:0003677|GO:0006355
Car07g03297 135 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 15 71 - -
Car07g03297 135 ProSiteProfiles NAC domain profile. 25 135 IPR003441 GO:0003677|GO:0006355
Car07g03297 135 PANTHER NAC TRANSCRIPTION FACTOR 56 15 71 - -
Car07g03297 135 Pfam No apical meristem (NAM) protein 26 71 IPR003441 GO:0003677|GO:0006355
Car07g03297 135 Gene3D NAC domain 34 85 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03297 Car-Chr7 60777768 60781862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03297 25 70 NAC Transcription Factor Family AT3G10480 47.826 9.17e-10 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car07g03297 NAM 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03297 - - ini:109154400 65.0846