Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03283 ATGGTTCTTCTAAGTAGCTGGATTTTCAATTCACATGTTTTTGTTAATTTCTTGCTGCTGATAATTAGTTGGGGCATAACCTATGGAACTGAAACTGATATATTATGCTTGAAAAGTATAAAAGAGTCTCTCAAAGATCCCAATGGTTATTTGAAGACTTCATGGGATTTCAACAATAAAACGGAAGGGTTTATCTGTAGATTTACCGGTGTCGAATGTTGGCATCCTGATGAGAATAGAGTTTTGAATCTCAAATTATCGAATATGGGACTCAAGGGTCCGTTTCCTCGAGGAATTATAAATTGTTCGAGTTTAACAGGTTTAGATCTTTCGATCAACTATCTGTCCGGAACCATTCCGGGAGATATATCTTCGCTTCTAACTTTTGTGACATCTCTTGATCTGTCTTCAAATGAGTTTTCTGGAGAGATACCTGATAGTCTTGCGAATTGTACCTATCTAAACACCCTTAAACTCAATCAAAACCAACTCACCGGTCAAATTCCTCTACGATTAGGCACTCTCGCGCGGATTAAGATGTTTGATGTATCCAACAATCTTTTGACTGGGCTGGTTCCAAACTTCACTGATGGTCAAGTTAGTGTCAATTATGCAAATAATCAAGGTCTTTGTGGATCTTCTTCATTGGGTACTTGTAACCCGAAGGGTTCCTCGAAGAGTAACACTGCGGTTATAGCTGGAGTAGCTGTTGGTGGAGTGACTCTTGCCGCGTTAGGGTTGGCTATTTTTATGTTCTTCTTTGTGCGCCGTGTTTCTTATAGAAAGAAGGAAGAAGACCCTGAAGGAAACAAATGGGCAAGAACTATGAAAGGAACTAAGACAATTAAGGTATCTTTGTTTGAGAAATCGATTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGCAATACCAATATCATCGGGTCCGGAAGAACAGGAGCTGTTTACAGAGCTACTTTTGAAGATGGGGCTACATTTATGGTTAAGAGGTTGCAGGAATCTCAACGCTCTGAGAAAGAATTTATGTCGGAGATGGAGACACTAGGTACGGTCAAACATCGTAATCTGGTTCCTCTTTTAGGTTTTTGCGTGGCGAAAAAAGAGAGGCTTTTGGTCTTTAAAAACATGCCGAATGGAATGCTCCATGATCAACTACATCCTGCTGCTGGTGATTGCACGCTCGACTGGCCTTTGAGGCTCAAAATTGCAATCGGAGCTGCCAAAGGATTAGCATGGCTTCATCATAGCTGCAATCCTCGTATCATTCACCGAAACATAAGCTCAAAGTGCATCTTGTTGGACGCAGATTTCGAGCCCAAAATTTCCGATTTTGGCCTTGCCAGATTGATGAATCCACTTGACACACATTTGAGTACTTTTGTAAATGGAGAGTTTGGTGATTTTGGTTATGTGGCTCCTGAATATACAAAAACTTTGGTCGCTACGCCTAAAGGCGATGTTTTTAGCTTTGGAACTATACTTCTCGAGTTGGTAACCGGTGAAAGACCTGCACATGTCGCTAAAGCTCCTGAAACTTTTAAAGGAAATCTAGTAGAATGGATCGCCGAGCTTTCAAGCAACTCACAACTCCACGATGCCATCGACGAATCGCTAGTTGACAAGGGTGATGATAACGAGCTTTTCCAATTTTTGAAGGTTGCGTGCAACTGCGTTACACTGGTCCCAAAGGAGAGGCCTACCATGTTTGAAGTATATCAGTTTTTAAGAGCCATTGGGGGTAAGTACAATTTTGCATCTGAGGATGAAATATTGGTACCTGAAGATATTGGTAATACTGATAACATGGTGGAACTTATTGTTGCAAGAGAAGGAAATAATTGA 1857 0.4066 MVLLSSWIFNSHVFVNFLLLIISWGITYGTETDILCLKSIKESLKDPNGYLKTSWDFNNKTEGFICRFTGVECWHPDENRVLNLKLSNMGLKGPFPRGIINCSSLTGLDLSINYLSGTIPGDISSLLTFVTSLDLSSNEFSGEIPDSLANCTYLNTLKLNQNQLTGQIPLRLGTLARIKMFDVSNNLLTGLVPNFTDGQVSVNYANNQGLCGSSSLGTCNPKGSSKSNTAVIAGVAVGGVTLAALGLAIFMFFFVRRVSYRKKEEDPEGNKWARTMKGTKTIKVSLFEKSISKMKLSDLMKATNNFSNTNIIGSGRTGAVYRATFEDGATFMVKRLQESQRSEKEFMSEMETLGTVKHRNLVPLLGFCVAKKERLLVFKNMPNGMLHDQLHPAAGDCTLDWPLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPLDTHLSTFVNGEFGDFGYVAPEYTKTLVATPKGDVFSFGTILLELVTGERPAHVAKAPETFKGNLVEWIAELSSNSQLHDAIDESLVDKGDDNELFQFLKVACNCVTLVPKERPTMFEVYQFLRAIGGKYNFASEDEILVPEDIGNTDNMVELIVAREGNN 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03283 618 SUPERFAMILY Protein kinase-like (PK-like) 283 580 IPR011009 -
Car07g03283 618 Gene3D Ribonuclease Inhibitor 30 221 IPR032675 -
Car07g03283 618 Gene3D Transferase(Phosphotransferase) domain 1 381 597 - -
Car07g03283 618 Gene3D Phosphorylase Kinase; domain 1 267 379 - -
Car07g03283 618 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Car07g03283 618 PANTHER LRR RECEPTOR-LIKE KINASE 5 595 - -
Car07g03283 618 Pfam Protein tyrosine and serine/threonine kinase 309 580 IPR001245 GO:0004672|GO:0006468
Car07g03283 618 SUPERFAMILY L domain-like 31 201 - -
Car07g03283 618 CDD STKc_IRAK 312 580 - -
Car07g03283 618 PANTHER RECEPTOR-LIKE PROTEIN 55 5 595 - -
Car07g03283 618 ProSiteProfiles Protein kinase domain profile. 306 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03283 Car-Chr7 60502749 60506245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03283 30 590 Receptor kinase-like Gene Family AT1G27190 46.113 1.58e-174 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Car07g03283 PK_Tyr_Ser-Thr 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03283 - - gmx:100801294 924.465