Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03276 ATGAATCCTCATAAACAAAACGACGCCGTTTCCCTTTCTGCTCTATTACCGTGTGCGTCGTTGCGCTTCTGCGGCTGCCCTATCCAAATCGTCTGCCGTCGCACACTGCCACCATCTTTCGTAGCTTCTCGTTTTCAGAAAATGGAGGAGGATCAAGAGATGGAGAAATTCGGAATGGAGAACGATTTTGACGGTGCTCAATGGATTGGTGGTGAGTTCTACTATCGAAAGCGCAAAGAGAAACGAACTCAAACCAAAGACGATGTTCTCTATGGAGTTTTTGCAGATTCtgaggatgatgatgatgatgaCTACTCTTCTAGAAAACGAAAGAAAGATTTCTCGAAGAAACAGGACCTTACTAAACCGGTGAATTTCGTTTCTACTGGAATTTTCATGCCTGATAAGGATAATATTGATGACAATTCCAAAGAACTGGGTGAAAAGGATAGTTATGTTAGTGAAGATAGGCCTGGTTTAGGTTTAGGTCTTGGTTTTGGGTCTGCTAGCACGTCGGGGTCTGGTTTAGGTTTTAATTATGGTCGTGGTGCTGCGAATGGTTCTGATAGGAATAATGAATCTGATGAGAATGAAAATGGTAATGGAGATGATAAGTTTTTGCCTACTGAGTTTGGgaagaagattaaggagggagcaatgaggagggagaaagaacgattggaggagaagaagaagaaagggaagaagcaagGACCGGGTGTAGGTCAGGATGGATCTGTGGATGTTGGGAAATTTGAGAAGCATACAAAGGGAATTGGAATGAAGTTATTGGAGAAAATGGGTTATAAAGGGGGTGGTCTTGGGAAGAATGAGCAGGGGATTTTGGCTCCTATTGAGGCGAAATTGAGGGCTAAGAATTCTGGTATTGGATTTAATGAATCGAAGGAGAGTACGGCGCCGTTGCCCGCTTTGCAGACAGAGAAGAAGAGTGCACCTGGAGGAGGGGTGGAGCTTTCAGCTGGCAGAACGAAAGAACGTTCATGGTTAaagcagttgaagaagatgaagaagaaagaagaggaagaGTATGTAACTGCCGAGGAGTTGTTGGCAAGTAAGCAAGAAGAAGATTCAGAGGTTGTTCAAAAGATTTATGATATGAGGGGACCACAGGTACGAGTGTTAACAAATTTGTCTGATTTGAATGCTGAAGAGAAAGCAAAGGAAAGGGATGTACCAATGCCTGAACTTCAGCATAATGTAGCACTGATAGTTAGGTTGGCTGAGGCTGACATCCAAGAGATTGATAGAGATTTGAGGAAAGAGAGGGAGACAGCACTTAGCTTGAAAAAAGAAAAAGAGAAGTTGGAAGCTGAAGCAGCACTTCAAAAGAAGCAGCTGGATAATTTGGAGAGAATAACAAGTGTGCTGGCCCGAGTTGGAGAAGAGCACACCTTAGGAACATTAACGTTGGATTCCCTTGCTCAATGCTTTAGGGACATGCACAAAAGATACGCGGATGACTATAAGTTGTGTAACTTGTCATGCATTGCTTGCTCATATGCTCTGCCTTTGTTTATCAGAGTGTTCCAAGGATGGGATCCTCTTCGAAATCCATCCCATGGTTTGGAGTTGGTGTCACAGTGGAAGGCATTGCTTCAAGGAGATGATTGCCATGATATATGGGACATATCATCGCCTTATACTCACTTGGTTTCAGAGGTTGTATTGCCAGCTGTTAGAATATCTGGTATCAATACCTGGCATGCACGAGATCCTGAGCCGATGCTACGGTTCTTAGAGTCATGGGAAAAATTGCTCCCTTCTTCAGTTCTTGCTACTATATTAGACAATATAGTCATGCCAAAACTATCGAGTGCGGTAGATACATGGGAGCCACATCGTGAGACCATTCCTATCCACACATGGGTGCATCCATGGCTACCTCTGCTAGGGCACAAGTTGGAGGGTATCTACCAGGTGATTCGTTTCAAATTGAGTACTGTTCTTGGCGCATGGCACCCAAGTGATGGTTCTGCGTATGCTATATTGTCTCCTTGGAAGACTGTATTTGATTCTGCTAGTTGGGAACAACTTATGCATCGTTTTATTGTACCGAAGCTGAAGGTTGTCTTGCAAGAGGACTTCCAAGTGAACCCGGCAAATCAGAATCTTGATCAATTTTATTGGGTAATGAACTGGGTTTCTGCTATTCCAATTCATCTGATGGTTGACACAATGGAGATCTTCTTTTCCAAGTGGCTTACGGTGTTGTATCGTTGGTTGTGCTCAAATCCTAACTTTGAAGAAGTTACTAAATGGTATTTGGGCTGGAAAGAACTTATTCCAAAAGATCTTTTGGCAAATGAAAGTATTCGATACCAGCTCAATTGTGGTCTTGATATGATGAACCAGGCTGTGGAAGGTATGGAGGTCGTGCAACCTGGTTTAAAGGAGAAAATGAGCTATCTTAGGGTACGCGAGCAGAGGCAATTTGAGAAAGCAGCAGCCTATGCTCAACAACAAGCTGCTGCAAGCTTGGGTGGAGCTGTCAATGCAGATGGTGTGGCTGGTGGTCATGAATTGAGCTTGAAAGAAGTCATCGAGTCCTATGCTCAGCAACATGGTTTACTGTTCAAACTTAAACCTGTAGCATCTCAGTTCTCAGGGGATTTTTTATGGCTTCTTAAATTGAGCTTTATGGCAGTGTTGGTACTAGAATATGGAAAGAATGTCCTAGAGCAAAGAACAACCAACACATCTCGTTTTTTCCTCCTTCTCCGTCTTTCTCTTTCGATCTCGCTTTTTGACAAGGTTGTTGGTTACCAACGTTGTACTTGCTATCGTGTTTCTTGCAAGTTGTTTGGAAGAGGACCTTGTGCAAGCCATTCTATGTCTTCTGTTAAAAGGTCTTCACACGGGCTTAAAAATGATGAGATTCAGGGTCAAGGCTCTGAAATTCTAGAAAGgcacaatgttgaaacacaactggctcaaaacactttcaaaagcagtgatgcactcaatcacgtcaatgacctagaaactatgGAACTTTATTCACGAGCAAGAGGTCAAGAAGAAGAGATCCTCTCCCTTCGTGAACAGATTGCAGTTTCATGTATGAAGGAGTTGCAGCTTTTGAATGAGAAATGCAAACTAGAGAGGGACCTTTCGGAACTAAGAATGGCAGTCGATGAAAGGCAAAATGAAGCGATCACATCTGCGTCAAATGATCTGGCTCGAAGGAAAGGTTATCTAGAAGAAAATTTAAAACTTGCCCACGAATTGAAAGTTGCAGAGGAAGAGAGATATGCCTTCATGTCATCTATGCTGGGATTGTTGGCTGAATATGGTCTGTGGCCTCGTGTTATGAATGCCTCTTCAGTATCCAATTATGTAAAGCATTTACATGATCAATTACAATGGAGGATACGGAATTCGCATGATAGAATTGGAGAGTTAACTTCTGGGATAGAAAACCATGCAGATACTGGTAATAATCATGTTGTTGAAAGTCCAAATTCTGCAAAATCGACAAATCACGCTCAGAGTGAATTCATGTTTCAGCATAACTTTCCCCAGCAAAATCTTATCGGAAATGAACAAAATCATCAACCAATGAGCAAAATGACAGGATATATGAACCCAGTTGTTAGTGGTGATGTAAACGGCACATTCAAAAGGGTAAACTATCAGGAGATTTCTAAGGCTGATAGGGACATATCTTTCTTCCGACATGGTTCAATTGATCAAATTGGTATGCAAGAGAGAAGTGGAGAAAGAAATTTTGCAAATGGCAATGGCAACCTGTATCAACTTCCACTTGATCATGATGAGACTGCCTCCTCTGTTTCTGAGGATGGCCCCGGCATTGAGAATTTTCAAATTTGTGGCGATGCTATTCCTGGAGAAAAACTTCTTGGATGTGGATATCCTGTTCGTCGAACTTCTCTTTGTATGTTTCAGTGGGTTCGGCATCTTCAGGATGGCACTAGGCAGTACATTGAAGGTGCCTCAAATCCAGAGTATGTAGTTACAGCGGACGATGTTGATAAATTGATTGCGGTTGAGTGTATTCCAATGGATGATAAAGGCCGTCAGGGAGAGCTAGTGAGGCTTTTTGCTAATGACCAGAACAAAATAAAATGTGACCCAGAAATGCAGCATGAGATAGACACATACTTGTCTAAAGGAGAAGCAATGTTCAGTGTTCTACTTCTGATGGATTCTTCTGAGAATTGGGAACAAGCAACTCTATTCTTACGACGATCAGGATACCAAATTAAGATAAATGGTACTGAAGCTCCAGTAGTTGCTGAGAAATTCTCGAAGGACTTATCGATTAAAGTTCCATGTGGTCTCTCAACACAATTTGTGTTAACATGCTTGAATGGATCTTCTCATCCTCTAAGCACATATAGCGTCCGAATGCGAGACACACTGGTGTTAACCATGCGACTCTTCCAGAGTAAGGTATTGGATGACAAAAGGAAAGGAAGAGCATAA 4470 0.4031 MNPHKQNDAVSLSALLPCASLRFCGCPIQIVCRRTLPPSFVASRFQKMEEDQEMEKFGMENDFDGAQWIGGEFYYRKRKEKRTQTKDDVLYGVFADSEDDDDDDYSSRKRKKDFSKKQDLTKPVNFVSTGIFMPDKDNIDDNSKELGEKDSYVSEDRPGLGLGLGFGSASTSGSGLGFNYGRGAANGSDRNNESDENENGNGDDKFLPTEFGKKIKEGAMRREKERLEEKKKKGKKQGPGVGQDGSVDVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGILAPIEAKLRAKNSGIGFNESKESTAPLPALQTEKKSAPGGGVELSAGRTKERSWLKQLKKMKKKEEEEYVTAEELLASKQEEDSEVVQKIYDMRGPQVRVLTNLSDLNAEEKAKERDVPMPELQHNVALIVRLAEADIQEIDRDLRKERETALSLKKEKEKLEAEAALQKKQLDNLERITSVLARVGEEHTLGTLTLDSLAQCFRDMHKRYADDYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSQWKALLQGDDCHDIWDISSPYTHLVSEVVLPAVRISGINTWHARDPEPMLRFLESWEKLLPSSVLATILDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGIYQVIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSASWEQLMHRFIVPKLKVVLQEDFQVNPANQNLDQFYWVMNWVSAIPIHLMVDTMEIFFSKWLTVLYRWLCSNPNFEEVTKWYLGWKELIPKDLLANESIRYQLNCGLDMMNQAVEGMEVVQPGLKEKMSYLRVREQRQFEKAAAYAQQQAAASLGGAVNADGVAGGHELSLKEVIESYAQQHGLLFKLKPVASQFSGDFLWLLKLSFMAVLVLEYGKNVLEQRTTNTSRFFLLLRLSLSISLFDKVVGYQRCTCYRVSCKLFGRGPCASHSMSSVKRSSHGLKNDEIQGQGSEILERHNVETQLAQNTFKSSDALNHVNDLETMELYSRARGQEEEILSLREQIAVSCMKELQLLNEKCKLERDLSELRMAVDERQNEAITSASNDLARRKGYLEENLKLAHELKVAEEERYAFMSSMLGLLAEYGLWPRVMNASSVSNYVKHLHDQLQWRIRNSHDRIGELTSGIENHADTGNNHVVESPNSAKSTNHAQSEFMFQHNFPQQNLIGNEQNHQPMSKMTGYMNPVVSGDVNGTFKRVNYQEISKADRDISFFRHGSIDQIGMQERSGERNFANGNGNLYQLPLDHDETASSVSEDGPGIENFQICGDAIPGEKLLGCGYPVRRTSLCMFQWVRHLQDGTRQYIEGASNPEYVVTADDVDKLIAVECIPMDDKGRQGELVRLFANDQNKIKCDPEMQHEIDTYLSKGEAMFSVLLLMDSSENWEQATLFLRRSGYQIKINGTEAPVVAEKFSKDLSIKVPCGLSTQFVLTCLNGSSHPLSTYSVRMRDTLVLTMRLFQSKVLDDKRKGRA 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03276 1489 Gene3D - 1278 1357 - -
Car07g03276 1489 Pfam GC-rich sequence DNA-binding factor-like protein 478 745 IPR022783 -
Car07g03276 1489 Coils Coil 412 460 - -
Car07g03276 1489 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 54 870 IPR045211 GO:0000390
Car07g03276 1489 MobiDBLite consensus disorder prediction 137 154 - -
Car07g03276 1489 Pfam G-patch domain 256 297 IPR000467 GO:0003676
Car07g03276 1489 Coils Coil 1070 1090 - -
Car07g03276 1489 Pfam Tuftelin interacting protein N terminal 51 150 IPR022159 -
Car07g03276 1489 Coils Coil 213 237 - -
Car07g03276 1489 PANTHER TUFTELIN-INTERACTING PROTEIN 11 54 870 - -
Car07g03276 1489 Coils Coil 336 363 - -
Car07g03276 1489 SMART G-patch_5 254 299 IPR000467 GO:0003676
Car07g03276 1489 MobiDBLite consensus disorder prediction 189 238 - -
Car07g03276 1489 ProSiteProfiles G-patch domain profile. 256 301 IPR000467 GO:0003676
Car07g03276 1489 MobiDBLite consensus disorder prediction 175 249 - -
Car07g03276 1489 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03276 Car-Chr7 60345758 60360773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03276 259 300 C2H2 Transcription Factor Family AT5G26610 52.381 4.68e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03276 K13103 - gmx:100781621 1220.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03276 07 60345758 60360773 Car07g03276 07 60345758 60360773 ECH