Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03250 ATGTTCTCCAGTGATATCATTAGGTTTTACGCTGCTGAATTGgttcttgcattggagtatcttcacgatttaggaatagtgtatcgagatttgaaaccagataaCGTGATGATTCAAGAAAACGGTCACATAATGCTCGTGGATTTTGATCTCTCCACAAAGCTGAATCCTAGATCGATTCAATTACTGAGTCATGACTCGTCCAAGAGATCTAAATCGGCGAATGAGAAACGCGTGAAAAAGCGATTGTTCTCGCGATTCTACCGTTGTAACTCGGGGATCTCACCGTGTGACTTGGATTTTGATTCGCAACCTAGCGTCAACTCGGTACGGCGGAACGAATCGGAATCGGTTGAAAAATCGAAATCGTTCGTTGGAACGGAAGAATACGTGGCACCTGAAATTGTGTGCGGAAAAGGTCACAGTTACGGAGTTGATTGGTGGTCACTCGGTGTCGTTTTGTATGAGATGCTGTATGGAACGACGCCGTTTAAGGGGACGAATAGGAAAGAAACGTTTTACAGGATTTTGTCTAAGGAACCGGAGCTAACGGGGGAGAAAACGGCGTTAAGAGATTTGATTAGGAAATTGTTGGAAAAGGATCCTGACCGTCGGATTCAGGTGGATGAAATCAAGGGTCATGATTTCTTTAAAGGGGTTAAGTGGGATATGGTGTTGCAAATGACAAGACCACCTTATATCCCTCCTCCGATTGAAATTGAGAACACAGTGGGGTTAAGCAAAACCTATGTGGAGTCATTTGTTCATGAGGTGTTTTTTCCACAGTGTGATGATAATAATGAAGAGAAAAAAAATACAATTGGAGAAAAATCAGAAAATAAGGATAATGGTGAGGAAAAGAGAGTGTGGGTTGATAAATTGAGTAATAGCCTCAATGAAAATGATGatttttttattttttga 924 0.3853 MFSSDIIRFYAAELVLALEYLHDLGIVYRDLKPDNVMIQENGHIMLVDFDLSTKLNPRSIQLLSHDSSKRSKSANEKRVKKRLFSRFYRCNSGISPCDLDFDSQPSVNSVRRNESESVEKSKSFVGTEEYVAPEIVCGKGHSYGVDWWSLGVVLYEMLYGTTPFKGTNRKETFYRILSKEPELTGEKTALRDLIRKLLEKDPDRRIQVDEIKGHDFFKGVKWDMVLQMTRPPYIPPPIEIENTVGLSKTYVESFVHEVFFPQCDDNNEEKKNTIGEKSENKDNGEEKRVWVDKLSNSLNENDDFFIF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03250 307 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 2 283 - -
Car07g03250 307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 26 38 IPR008271 GO:0004672|GO:0006468
Car07g03250 307 PANTHER FLIPPASE KINASE 1-RELATED 2 283 - -
Car07g03250 307 Gene3D Transferase(Phosphotransferase) domain 1 117 237 - -
Car07g03250 307 SUPERFAMILY Protein kinase-like (PK-like) 2 258 IPR011009 -
Car07g03250 307 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03250 307 Pfam Protein kinase domain 2 59 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03250 307 Pfam Protein kinase domain 117 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03250 307 SMART serkin_6 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03250 307 Gene3D Transferase(Phosphotransferase) domain 1 2 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03250 Car-Chr7 60115860 60117524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03250 1 267 AGC Kinase Gene Family AT4G13000 63.060 3.41e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car07g03250 Pkinase 1.4e-22 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00954 03 49474669 49476680 Car07g03250 07 60115860 60117524 PCT