Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03242 ATGGATGCGGCTGCTGTTGGTGGAGCTTTTCTCTCTGCTTTCATTCAAGTTGTTCTCTTCAGGCTTGCTTCTCCTCAGTTTGCTAATTTCCTCACTGGAAATAAGCTTGATGTCAATTTGATCCAAAGGTTGAAGAACACTCTTTATGCTGTTGAAGCTGTTTCGCATGATGCTGAACTGAAACAGATCAAAGACTCTGCTGTTAACAACTGGCTTGATGACCTCAAAGATGCTCTCTATCTTGCTGATGACATTCTCGATCACATTTCTACCAAAGCTGCTTCTACTCAGAAGAACAAAAAGGTGAGTACAAAGATGGTTCGTAAGTTGGAAGATATAGTTGCTAGGCTTGAAACCATTCTTAAACGCAAAGATATTCTTGGTCTTCAACATATTCCAACTCACCACCACTATTCTTGGAGAACTCCATCAACCTCCCTAAATCACGGATCTAACATATTTGGTAGAAATCAAGACATAGAAGCCATACTCAAATTACTTTTACATGATGGCGATGATGATAGTGATAAGATTTCTGTGATTCCTATAGTTGGCATGGGTGGTGTTACAAAGGCCATTGCAGAGGAAGTTAGAAGTGCTTGTAATACAAATAATTTGAATATTCTTCAGCAAGATTTGAAGGATAAATTGACCGGAAAAAAGTTCTTAATTGTTCTGGATGATGTCTGGACCGAAGATTATGACAGTTGGAATTCTCTTATAAAGCCTCTTCGATGCGGAGCTAAAGGAAGTAAAATTCTTGTAACAACCCGTAGTCAGAAGGTTGTTTCTATGGTCCAAACTTTTCAAGCTTACTCTCTTGAGCAATTGTCTGATGAGGATTGCTGGTCTGTGTTTGCAAACCATGCATGCCTTTCTCAAGAAAAATCCACTCAGAATATGGATCTCGAAAAAATTGGTGAAGAGATTGTTAGAAAATGTAAGGGGTTGCCTTTAGCAGCACAATCACTTGGGGATTTGTTGCAACGGAAACGTGACATCAGGGATTGGAAAAAAATACTCAATAGTAATATTTGGGAAATTGATGAAAAGGAGAGTGAGATGATTCCAGCACTAACAATTAGTTATCATTATCTCCCTCCCTATTTGGAAACTATTGGTATAAAGAGGGAAATTGGTTCTTTTGTGTTAGAATCTCATATTATTGGAAGAGAAGATAACAAAAACGAAATATTAAGCTTGTTGAGGCAGCCACATGAAAATCAGAATGTCTCCTTCATTGCTATCGTTGGAATTAGTGGTTTAGGAAAGACAACTCTTGCTCAATTGGTATATAATGATTGGGAAGTGCAAAATCTGTTTGAAAAGAGAATGTGGGTATGTGTCTCTCATAAATTTGATGTCAAAACTATTGTGAAGACAATGTTGGAGTCATTAACTGAGAGCAAAATTGGTGATACATTATCATTAGAAAACTTGCAAAATATGCTTTGTGAAAATTTAACTGGTAAAAGATACTTGTTAGTCTTGGATGACGTTTGGAATGAGATTTATGAAATATGGGATCAACTGAGGACTTATTTGATGTATGGTGCTCAAGATAGTAAGGTTGTAGTGACAACTCGTTCATATGGTGTAGCACAAACAATGGGTGCAAGTGTCTCCTATGCTCTATGTTGTTTGAATCAAGAAGAATCTTGGATTTTGTTGAAGAATATTGCTACATATGGGGATAAGACCAAAATAATGAACCAAACTCTTGAATCAATTGGTAGGAAGATAGTTGAAAGGTGCAGTGGAGTTCCACTAGAAATCAGAACACTAGGAGGCCTATTACAGGATAAAAGTGAAGCAAGGGAATGGAAGGATGTTTTAGAAGGTATGTTGTGGAAATCAGGTGAACACGAAGCAGTCATCATGCATGTGTTGCACCTTAGTTACCAAAATTTATCGCCTCTGCTGAGACAGTGTTTTGCTTACTGCTCTATATATCCTAAAGGTTGGCAAATAGAGAAGGATGAGTTGGTTCAACTGTGGATGGCACAAGGTTATCTTGAATTTTCATTTGAACAAAATCTCCTCGAAGACATTGGCAACCAATTCGTGAAGATTTTCTTGATGAAGTCAATTTTCCAAGATGCAAAAATGGATGAAGACGGTGATATTCATAGTTTCAAAATGCACGATTTAACGCATGATCTCGCAATGCAAGTAGCAGGCAACGATTGTTTTTACTTGGATAGTAAGACAACAATTCCTGNNNNNNNNNNNNNNNNNTTGGAACCCAATGCAGTTCACTTGTTGGACTCATTAGATGGAAGCATGCTTCGAACTTTGATTTTGCTGTCTTCCGAAGAGGATGAGGAATTGAATTGGGATGCATTGTCTGTTATTTCAAATTTCAAATCCTTACGTGCCTTGAAGCTGTCATACTCATCTTTAAGCAATTTGTCTGATTCAATTGGAAATCTGAAACATTTAAGATATCTTAACTTATCAAGCTGTAGAGGATTGGGGAATCTTTTCAAATCCATCAACATTAATGTCTTCTTACAAACACTAATACTGATGCCAAATGAAAATGTTGTATTTTCTACAATGGCTATCTCAAAATTAATCAATTTGAGACACCTTCACATCTCTGATTGGGAAGCCTCTGAAGACAAGAATCCAACTAAATTTAAAAGAATGAGCATGCAACAAAACAAAAGTATGTTTTTTTCAAACTGGCTTTCTCCACACACAATGACAAATCTTGTTGAAATCTCTTTGTTTTTGTGTGGAAGCTTTCGGTGTCTCCCACCATTAGAATGTCACCCATTCCTTAAGTCACTTCATGTAAGTTTCCTTGAAGACCTAGAGTACGTATATTATGAAGAGGTTTTGCCTTTAACATTCTTTCCATCTTTGGAGAGTCTCACTTTCTGGTTTTGTGGGAAGCTAAAGGGATGGTGTAGGATGTTAGATGATTTAAATCATCCTAACTCTTCATCTCATCTCTCCCTGCCTCCCTTTCCTCGTCTTTCTCAACTATCAATCATTGGATGTCAGATGTTGACTCAAATGCCTACTTTTCCAAACCTTGAGAACAGGTTGGAATTGTTTGATAGTAGTGTGGAGACATTGGAAGCAACACTAAACATAGCAGCATCACAATATCAGAATGACTCCCCTCCTCTTTCCATGCTCAAATCCTTGCACCTTGATCGAATGAGCTTCAATCTGAATCAAATTGATTGGTTTACTTGCGAAACAATTCAAGATATTGGTGTTTGGTTTAAGGACAACCACAACTACTTTCCTTCCCTGCAAAAACTCTCCATTCATAATTGTGAAGACCTAGAGGCATTGCCAGATTGGATATGCAACCTCCAATCGCTTACGCATCTCTCCATACATGATTGCATAAATTTGGCTTCGCTGCCTGAAGAAATGTTTCTTCTTAGCAAATTACAGACCTTGGAAATCATTGGTTGCCCCCTCTTAATTGAGGAATGCGAGACCCGAACAAGTGCAACTTGGACCAAAATAGCTCAGGTGCCAAAAATAATTTTGAAGCGATCTTCATTGGAAAGAGGATGGGAGGGtgtaatggatggaaagacacgtgaggagcaggtgacagaaaatgacacagcaggtgccaataatagcatgaataacaaccttcctaaaaatgaggagttaagacgtggagaaagagtgagaaggcccacatgggaactaacagactag 3696 0.3617 MDAAAVGGAFLSAFIQVVLFRLASPQFANFLTGNKLDVNLIQRLKNTLYAVEAVSHDAELKQIKDSAVNNWLDDLKDALYLADDILDHISTKAASTQKNKKVSTKMVRKLEDIVARLETILKRKDILGLQHIPTHHHYSWRTPSTSLNHGSNIFGRNQDIEAILKLLLHDGDDDSDKISVIPIVGMGGVTKAIAEEVRSACNTNNLNILQQDLKDKLTGKKFLIVLDDVWTEDYDSWNSLIKPLRCGAKGSKILVTTRSQKVVSMVQTFQAYSLEQLSDEDCWSVFANHACLSQEKSTQNMDLEKIGEEIVRKCKGLPLAAQSLGDLLQRKRDIRDWKKILNSNIWEIDEKESEMIPALTISYHYLPPYLETIGIKREIGSFVLESHIIGREDNKNEILSLLRQPHENQNVSFIAIVGISGLGKTTLAQLVYNDWEVQNLFEKRMWVCVSHKFDVKTIVKTMLESLTESKIGDTLSLENLQNMLCENLTGKRYLLVLDDVWNEIYEIWDQLRTYLMYGAQDSKVVVTTRSYGVAQTMGASVSYALCCLNQEESWILLKNIATYGDKTKIMNQTLESIGRKIVERCSGVPLEIRTLGGLLQDKSEAREWKDVLEGMLWKSGEHEAVIMHVLHLSYQNLSPLLRQCFAYCSIYPKGWQIEKDELVQLWMAQGYLEFSFEQNLLEDIGNQFVKIFLMKSIFQDAKMDEDGDIHSFKMHDLTHDLAMQVAGNDCFYLDSKTTIPXXXXXXLEPNAVHLLDSLDGSMLRTLILLSSEEDEELNWDALSVISNFKSLRALKLSYSSLSNLSDSIGNLKHLRYLNLSSCRGLGNLFKSININVFLQTLILMPNENVVFSTMAISKLINLRHLHISDWEASEDKNPTKFKRMSMQQNKSMFFSNWLSPHTMTNLVEISLFLCGSFRCLPPLECHPFLKSLHVSFLEDLEYVYYEEVLPLTFFPSLESLTFWFCGKLKGWCRMLDDLNHPNSSSHLSLPPFPRLSQLSIIGCQMLTQMPTFPNLENRLELFDSSVETLEATLNIAASQYQNDSPPLSMLKSLHLDRMSFNLNQIDWFTCETIQDIGVWFKDNHNYFPSLQKLSIHNCEDLEALPDWICNLQSLTHLSIHDCINLASLPEEMFLLSKLQTLEIIGCPLLIEECETRTSATWTKIAQVPKIILKRSSLERGWEGVMDGKTREEQVTENDTAGANNSMNNNLPKNEELRRGERVRRPTWELTD 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03242 1231 Gene3D - 276 366 IPR042197 -
Car07g03242 1231 Gene3D - 547 633 IPR042197 -
Car07g03242 1231 MobiDBLite consensus disorder prediction 1213 1231 - -
Car07g03242 1231 Gene3D - 24 126 - -
Car07g03242 1231 PRINTS Disease resistance protein signature 585 599 - -
Car07g03242 1231 PRINTS Disease resistance protein signature 809 825 - -
Car07g03242 1231 PRINTS Disease resistance protein signature 487 501 - -
Car07g03242 1231 PRINTS Disease resistance protein signature 413 428 - -
Car07g03242 1231 PANTHER OS05G0414200 PROTEIN 35 370 - -
Car07g03242 1231 Gene3D Ribonuclease Inhibitor 975 1166 IPR032675 -
Car07g03242 1231 Pfam NB-ARC domain 192 343 IPR002182 GO:0043531
Car07g03242 1231 Pfam NB-ARC domain 392 635 IPR002182 GO:0043531
Car07g03242 1231 PANTHER DISEASE RESISTANCE PROTEIN RP 384 1106 IPR044974 GO:0006952
Car07g03242 1231 PANTHER DISEASE RESISTANCE PROTEIN RP 35 370 IPR044974 GO:0006952
Car07g03242 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 648 IPR027417 -
Car07g03242 1231 SUPERFAMILY L domain-like 713 1163 - -
Car07g03242 1231 Pfam Rx N-terminal domain 10 101 IPR041118 -
Car07g03242 1231 PANTHER OS05G0414200 PROTEIN 384 1106 - -
Car07g03242 1231 MobiDBLite consensus disorder prediction 1196 1212 - -
Car07g03242 1231 Gene3D Ribonuclease Inhibitor 747 965 IPR032675 -
Car07g03242 1231 MobiDBLite consensus disorder prediction 1186 1231 - -
Car07g03242 1231 Gene3D - 378 543 IPR027417 -
Car07g03242 1231 Gene3D - 190 271 IPR027417 -
Car07g03242 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 371 IPR027417 -
Car07g03242 1231 Gene3D - 634 725 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03242 Car-Chr7 60051568 60061474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03242 410 725 WRKY Transcription Factor Family AT5G45050 21.384 5.05e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03242 - - cam:101511080 2401.32