Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03241 ATGTATTCTTCATCATCCTCAAAACCACGATGGATACacgacgtattcataaatttcagaggcgaagacattcgtaaaaccttcgtttctcatctctacgccgtcctctcaaattccggaatcaacactttcctcgacagcgacaagctcgaaaaaggagaagatataggacacgaacttcttcaagcaatttcagtatctcatgtatcaattatcgttttctctaaaaagtactctgaatctagttggtgtcttaacgaacttgataaaatcatggagtgccgtagaactcaaggtcaaattgttttgcctgtcttttatgatgttgatccttctgttgttcgtcatcagaaaggtgattttggaaaagctttggaagttgctgcaaaaagtaggtatataattgccgaagttatggaaaaggttttgtgtagatggaaagttgtgttaactgaagcttccaatttgtctggttgggatGGGAGTGCTTTCAGGAGTGACCGTGaattagtgaagaaaattgttgaagccattttgccaaaactagacagcacaaccttgtctataactgaatttccagttggattagaatcccatgtgaaacaagtggtgcaattgattgagaaacaacctggcgatgtttgtatggtagggatctggggcatgggaggatcaggtaaaacgactgttgccaaagccatctacaatcaaactcatcgtacatttgagtgtacaagtttcattgaaaatattagagaagtttgtgaaaaggatactagagggtatattcatttacaacaacaacttatttcggatgtcctcaaaacaaaggagaagatacatagtattgcgttggggacagctagggtccagaaagtgctttctggaaaaaaagcacttgtggtacttgatgatgtaaccgaatttcagcaaataaaagccctatgtggaaatcataatttttttggttctggaagtgtattaattgttacaaccagggatgtgcacatacttaagttacttaaagttgactccgtctatgaaatgaaggaaatgcacaaaagtgagtcccttgagcttttttgctggcatgcttttagaaaagcaagtcctataggaggctttagtgacctctcaagaaatgtggttgcttattgtggagggttaccactggctcttgaagtccttggatccttcttatttgagaggaccaaacaagaatggataagtgtactattgaagttagagagaattcccaatgatcaagtgcacgagaaactgagaataagctatgatggtttaaaggatgatatggaaaaggatatatttcttgacatatgttgtttctttattggtaaggatagagcctatgttacagaaatattaaatggctgtggactttatgctgatattggaatagctgtcctcatagatcggagcctcctaaaagttgagaagaataacaagcttggaatgcacgatttaataagagacatgggaagagaaattgtccgtgaaagttcagcaaaagagcctgggaagcgttgtcgattgtggtttcatgaggatgtacatgacgttttgacaaaaaatactggaacagaaactgttgagggactgattttgaacttgcaaagaacaggcagagttagctttagtactaatgttttccaagacatgaagaaactgagacttttacaacttgatcgtgttgatctcactggagatttggggtacctttccaaacaactgagttgggttaattggcaacgatctaccttcagatttataccggatgactttgatcagagaaatctcaatgtttttgaattaaaatatagcaatgttaaacaagtttggaaggaagctaagttgctgcagaagctaaaaattctcaatctcagtcactcgaagtacttgaaaagcacccctgactttacaaaattaccaaatctcgagaagcttattatcaaggattgtcaaagtttatccaacatacacctgtccattggagatctcaagaatattcttctaataaatttgaaggactgtacaagtcttggcaatcttccaagagtgatctatcaattggcctcagtgaaaactctcatcctttctggttgttcaaagattgacaaattggaagaagatatagtgcaaatggaatcattgacaactctaattgcagcacatactggtgtcaaacaagtgcctttttcaataataaggtcaaaaaacattggatatatatccctaTGTGGATTTGAAGGATTATCACGTGATATTTTTCCTCCTCTCATTTGGTCTTGGATGTCACCGACAATGAATTCCGTAGCACATATTCCCCCTTTTGGTGGCATGTCAATGTCTCTTGTTTCCATAGATGTAGATAGTAATAATTTGGGCTTGGTCTTTCAATCACCAATACTTAGCAGCTGTTCAAAACTTAGAAGTGTCTGGGTACAATGTCACTCAGAGATTCAGCTGAAACAAGAGTTAAGAAGATTTCTTTATGATCTCATTGAGTTGGAAATATCACATGCATCACAAATCTCGGATCCTTCCTTGAAATCGATTTTGATTGAAATGGGAAAATGCCAAATAGTCAACAATACTTTTGGCAAGAGCTTATCACAGGGATTGACAACTGATGATTCTAGTGCCTCTTTCCTTCCGGGTAATAATTATCCTTCTTGGTTAACCTATACATGTGAAGGACCTTCTGTATATTTTCAAGTGCCTGAGGATAGTGTTTATGGTATGAAGGGAATAACTTTATGTATTCTTTACTCATCAACACTTGAAAGCACGGCAAATGAATGTCTCACTAGTGTCTTGATCATTAATTACACTAAGTTCACTATTCAGATATACAAGAGAGACACAGTTATGTCCTTTAATGATGAAGATTGGCAAGGCGTAGTATCAAATTTAGGAGTTGGTGACAATGTGGAGATTATTGTAGCTTTTGCCAATGGATTGATTGTTAAGGAGACAGCTATCTATCTAATATATGATCAGTCAAATGCTATGGAAATTGATTTGGCTTATCTTCTTCAAAGCGTTGACTTCAATTTCTTCAAATCAATGTCTTCTTCatcatcatcatcctccaatcatcaatggctctacgacgtattcctcaacttcagaggagaagacacacgtagcaaattcgtttctcatctccatgcatcactctcaaatgcaggaatcaacactttcgttgattaccaacttgacaaaggaacagaacttgaatctgaacttctgaaaacaatagaagactctcacatatccattgttgtattctccgaaacatacacagaatcaagttggtgtcttaatgagcttgaaaagattatgaaatgtagaagaatttatgggcaagttgttgtgcctattttctatgatgttgatccttctgttgttcgtcgtcagaaaggtgcttttggaaatgctttgagacgtagtgcagatagtagatactttaaaggagaagctgtggaatatgtggtttctaggtggagaaatgcactcattcaagcttcaaatttgtctggttgggatGTTACCAATTGCAGGAATGAAGGTGAACTAATACAACAAATTGTTGAGGATGTTTTGACAAAAATACAAAACACATTCTTGTCTATTACTGAATTTctagttggattggaatctcgtgtacaacaaatgatcgagtttattgaaaatcaatcaaacaaggtctgtatgatagggatatggggaatgggaggatccggaaaaacaaccacagccaaagctatctacaatcgaatccatcgaaaatttgtggatagaagtttcatagaaaatgttagagaagtttgtgaaaaagataatagagggattattcatttacaagaacaacttctctcagatgtcttaaaaacgaaggagaagatacatagcgttgcattggggccaattgtgattgaaaatagacttaaaggaaaaagggcacttgttgtacttgatgatgtgaccacatctgagcaattaaaagccttgtgtggaaatccgaagttatttggttcaggaagtgtgttaattgttacaactagagatgtacgtttacttaatttacttagtgccgactatgtctgtacaatgacagaaatggatgaaaaggagtcacttgagcttttcagttggcatgcttttggacaaccgagtccaaatgtagacttcaatgaactctccaaaaatgtagtagcttactgtggaggattgccacttgctcttgaagtccttggatcttacttatatgagaggacaaaacaagaatggagaggtgtattgtcgaaattagagagaattcccaatgatcaagtacaagagaaactgagaataagctatgatggtttagaggatgacacagaaaaagatatatttcttgatatatgttgtttctttatcggcaaggacatagcctatgttacagaaatactaaatggttgtggactttatgctaatattggaatacctgtcctcatagaacgaagtctcataaaagttggaaagaataacaaacttggaatgcatgacttgctacgagacatgggaagagaaattgttcgtgaaagttcaggaaaagtgcctgggaagcgtagtcgattgtggtttcatggggatgtacatgatgttttgacaacaaatactggaacagaaaccgtagaaggattggttttgaagtcgcaaagcactagtgaagtttgcttcaatgctgattctttcaaggaaatgaagaaacttagacttttacaacttgatcatgttgatattactggagattatggacatctttctaaagaagtaagatggctccattggcaggggtttacattaaactatatacccaattacttttatcaaggaaatctagttgttgttgacttaaggcacagttacattaaacaagtttgggatgaaaccaagttgatggagaagctaaaaattctcaatctcagtcattccaagtacttggaaaacacccctgacttttcgaaactgccgaacctagaaaagctcattatgaaggattgtccaagtttgttcaagatacaccattccattggtgatcttaagaatgttcttttgataaatttgaaggactgtacaggtcttagaagtcttcctaggaaaatctatcaattgaaaactttgaaaactctcgtcctttctggttgttcaaaaattgacaaattggaagaagatatagttcaaatggagtcgttgacaacactgattgcaaaagatacatctataaaagaggttccctattcaatcgtaagatcgaaaagcatcggttatatatccctaTGCGGATATGAAGGATTATCACGTGATGTTTTTCCTTCTCTCATTAGGTCTTGGATAACACCAACCATGAATTCCCTACTCTATGTTACCCCATTTGGGAGCATGTCATTGTCTCTAATTTCCTTTGCTTTTGAGAGTGATAATTTGGGCTCTTTATCACCAAATCCTAGCAGGCTTTCAAAACTTGAAAGTTTTTGGGTTGAATATCGCTTAGAGGTTCAAGTAACTCAAGAATTAAGAACATATCTCGATGATCTATACAATCTAAATTTTACTGAGTTTGAAGAAGCAACATCACAAAGCTCAGGTCTTTCCTTGAGATCACTTTTGATGGGAATGAGCAGTTGCCACATGGTCGCCAATACTGGAAATAGCATATCACAGACAATGTCAGGGGAATCATCTAAAGTTCACAAGAAATATAGACTTCCAGAAAGTTCAGAAAAACAGATTAACCAGAGGATAGACTCTCAGACAATTCGCGTGGACTCTGATGAGGAATATGAAAGCCTCCCATCATTCAAACGCACTAGGAAGGTGACTAAGGTTATTTTCACTTATTCTGGAAAAGACACTAGCAGTCATTGCTTCTAA 5940 0.1 MYSSSSSKPRWIHDVFINFRGEDIRKTFVSHLYAVLSNSGINTFLDSDKLEKGEDIGHELLQAISVSHVSIIVFSKKYSESSWCLNELDKIMECRRTQGQIVLPVFYDVDPSVVRHQKGDFGKALEVAAKSRYIIAEVMEKVLCRWKVVLTEASNLSGWDGSAFRSDRELVKKIVEAILPKLDSTTLSITEFPVGLESHVKQVVQLIEKQPGDVCMVGIWGMGGSGKTTVAKAIYNQTHRTFECTSFIENIREVCEKDTRGYIHLQQQLISDVLKTKEKIHSIALGTARVQKVLSGKKALVVLDDVTEFQQIKALCGNHNFFGSGSVLIVTTRDVHILKLLKVDSVYEMKEMHKSESLELFCWHAFRKASPIGGFSDLSRNVVAYCGGLPLALEVLGSFLFERTKQEWISVLLKLERIPNDQVHEKLRISYDGLKDDMEKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGIAVLIDRSLLKVEKNNKLGMHDLIRDMGREIVRESSAKEPGKRCRLWFHEDVHDVLTKNTGTETVEGLILNLQRTGRVSFSTNVFQDMKKLRLLQLDRVDLTGDLGYLSKQLSWVNWQRSTFRFIPDDFDQRNLNVFELKYSNVKQVWKEAKLLQKLKILNLSHSKYLKSTPDFTKLPNLEKLIIKDCQSLSNIHLSIGDLKNILLINLKDCTSLGNLPRVIYQLASVKTLILSGCSKIDKLEEDIVQMESLTTLIAAHTGVKQVPFSIIRSKNIGYISLCGFEGLSRDIFPPLIWSWMSPTMNSVAHIPPFGGMSMSLVSIDVDSNNLGLVFQSPILSSCSKLRSVWVQCHSEIQLKQELRRFLYDLIELEISHASQISDPSLKSILIEMGKCQIVNNTFGKSLSQGLTTDDSSASFLPGNNYPSWLTYTCEGPSVYFQVPEDSVYGMKGITLCILYSSTLESTANECLTSVLIINYTKFTIQIYKRDTVMSFNDEDWQGVVSNLGVGDNVEIIVAFANGLIVKETAIYLIYDQSNAMEIDLAYLLQSVDFNFFKSMSSSSSSSSNHQWLYDVFLNFRGEDTRSKFVSHLHASLSNAGINTFVDYQLDKGTELESELLKTIEDSHISIVVFSETYTESSWCLNELEKIMKCRRIYGQVVVPIFYDVDPSVVRRQKGAFGNALRRSADSRYFKGEAVEYVVSRWRNALIQASNLSGWDVTNCRNEGELIQQIVEDVLTKIQNTFLSITEFLVGLESRVQQMIEFIENQSNKVCMIGIWGMGGSGKTTTAKAIYNRIHRKFVDRSFIENVREVCEKDNRGIIHLQEQLLSDVLKTKEKIHSVALGPIVIENRLKGKRALVVLDDVTTSEQLKALCGNPKLFGSGSVLIVTTRDVRLLNLLSADYVCTMTEMDEKESLELFSWHAFGQPSPNVDFNELSKNVVAYCGGLPLALEVLGSYLYERTKQEWRGVLSKLERIPNDQVQEKLRISYDGLEDDTEKDIFLDICCFFIGKDIAYVTEILNGCGLYANIGIPVLIERSLIKVGKNNKLGMHDLLRDMGREIVRESSGKVPGKRSRLWFHGDVHDVLTTNTGTETVEGLVLKSQSTSEVCFNADSFKEMKKLRLLQLDHVDITGDYGHLSKEVRWLHWQGFTLNYIPNYFYQGNLVVVDLRHSYIKQVWDETKLMEKLKILNLSHSKYLENTPDFSKLPNLEKLIMKDCPSLFKIHHSIGDLKNVLLINLKDCTGLRSLPRKIYQLKTLKTLVLSGCSKIDKLEEDIVQMESLTTLIAKDTSIKEVPYSIVRSKSIGYISLCGYEGLSRDVFPSLIRSWITPTMNSLLYVTPFGSMSLSLISFAFESDNLGSLSPNPSRLSKLESFWVEYRLEVQVTQELRTYLDDLYNLNFTEFEEATSQSSGLSLRSLLMGMSSCHMVANTGNSISQTMSGESSKVHKKYRLPESSEKQINQRIDSQTIRVDSDEEYESLPSFKRTRKVTKVIFTYSGKDTSSHCF 1979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03241 1979 PRINTS Disease resistance protein signature 624 640 - -
Car07g03241 1979 PRINTS Disease resistance protein signature 386 400 - -
Car07g03241 1979 PRINTS Disease resistance protein signature 216 231 - -
Car07g03241 1979 PRINTS Disease resistance protein signature 293 307 - -
Car07g03241 1979 Gene3D - 7 187 IPR035897 -
Car07g03241 1979 ProSiteProfiles TIR domain profile. 1042 1212 IPR000157 GO:0007165
Car07g03241 1979 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 446 IPR027417 -
Car07g03241 1979 SMART till_3 1043 1186 IPR000157 GO:0007165
Car07g03241 1979 SMART till_3 12 156 IPR000157 GO:0007165
Car07g03241 1979 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 1005 IPR044974 GO:0006952
Car07g03241 1979 Gene3D - 1210 1376 IPR027417 -
Car07g03241 1979 Gene3D - 188 346 IPR027417 -
Car07g03241 1979 SUPERFAMILY L domain-like 492 853 - -
Car07g03241 1979 Pfam TIR domain 13 190 IPR000157 GO:0007165
Car07g03241 1979 Pfam TIR domain 1044 1218 IPR000157 GO:0007165
Car07g03241 1979 Gene3D - 352 435 IPR042197 -
Car07g03241 1979 Gene3D - 1381 1465 IPR042197 -
Car07g03241 1979 SUPERFAMILY L domain-like 1544 1852 - -
Car07g03241 1979 SMART AAA_5 213 341 IPR003593 -
Car07g03241 1979 SMART AAA_5 1243 1386 IPR003593 -
Car07g03241 1979 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 1005 - -
Car07g03241 1979 Pfam NB-ARC domain 1228 1451 IPR002182 GO:0043531
Car07g03241 1979 Pfam NB-ARC domain 197 421 IPR002182 GO:0043531
Car07g03241 1979 Gene3D - 1040 1209 IPR035897 -
Car07g03241 1979 ProSiteProfiles TIR domain profile. 11 182 IPR000157 GO:0007165
Car07g03241 1979 SUPERFAMILY Toll/Interleukin receptor TIR domain 1033 1189 IPR035897 -
Car07g03241 1979 Gene3D Ribonuclease Inhibitor 527 884 IPR032675 -
Car07g03241 1979 Gene3D Ribonuclease Inhibitor 1554 1923 IPR032675 -
Car07g03241 1979 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1214 1476 IPR027417 -
Car07g03241 1979 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1046 1917 - -
Car07g03241 1979 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 159 IPR035897 -
Car07g03241 1979 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1046 1917 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03241 Car-Chr7 60010694 60023721 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03241 13 741 WRKY Transcription Factor Family AT4G12020 30.120 3.52e-79 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03241 - - aprc:113850721 2119.35