Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03238 ATGGAAAACCAGTTCTTTTTGAATGCTGGATTTGAACCTTCAATGCCAACATGGCAATCACTTTCTTCAGCCATGGAAATTCAACCAACAACACTTCTAAATTGTTCCTCTGACCAAAACCAAGATTGTTTTTTCAACCCAAATTGGGAAAAGTCAACGGATCAACAAAATCATCACTTTGATTCTTCAGCACTTAGTTCAATTGTTTCATCCCCAATTTCATCATCACCACCCAATGAAAATTTCATGATGAGGGAATTAATAGGAAAGTTAGGAACTTTTAGAAACTCTTGTGATGAGATCTCACAACATTTTGTGAAAGAGAATATGCAAAATATGAATTCAAGTGTTGATCTTGGTTTTGTTGAAAGGGCTGCAAAGTTTTCTTGCTTTGGAAGCAAAAGTTTCAATGAAAGGAGTAACAACCAATTTGTGATGAAAAACAACAATGTTGAGTTTGTTCAAAGATCTGTTAAAGTAATGGAAAATGGGAAGATACTACCAAGAGTTTCAAGTAGTCCTTCACTCAAAACACTTGTGTCACAAATTAATAACATAGAGAACAAGAATGAAAATGGGAGAATGGAAGTGGCTAATTCTCAAGAAGAATCTACAATTTCTGAGCAAAATACACCAAATGGAGAAATGGGTGTCAAAGTTTCACTTGATATTATGAATTCAAGGAAAAGAAAAGCTTCTTCTTCTAAGGGAAAAGCTTCAAATTCTTCCAGTCCAAAGAAGGGTGTTGAAGGTAGTGGTGAAGAGTCAAATGCAAAGAAAAGTAAGTCAAATGAAGGTGAGAGAAATGAAAATGGTGGCATGAATATGGAGGAAGATTCCAAAGAAGGTACTACTAATGCAGGGGAAGAGAAACAGAACAAGAGTAATTCAAAACCTATTGAACCTCTAAAAGATTACATCCATGTCAGAGCAAGAAGAGGTCAAGCTACTGACAGTCATAGTCTTGCAGAACGTGTACGGAGGGAGAAAATCAGTGAAAGGATGAAACTTCTGCAAGATCTTGTACCAGGTTGCAATAAGGTTACTGGAAAAGCACTTATGCTTGATGAAATTATAAATTATGTTCAGTCATTGCAACGTCAAGTTGAGTTTTTGTCTATGAAATTGTCTTCTGTTAACACAAGGATGGATTTAAGTATTGAAAGTCTTGTATCAAAAGATGTATTTCAATCAAATAATTCATTGCAAAATTCAATATTCCAATTAGATTCCCCAGCACCATCCTTTTATGGACAAAACCAAGCTATTCATAATAACATTCCTAATACAACTGTGACCCATTGCTCAGTGGACACATTAGATCCTTCTTTGTCCCAAAATGTTGGCATGCATTTACCTCTTCTAAATGGGTTTAATGAAGCTGCCTCACAGTATCCATTAACATTTTGTGAGGAGGACTTACACACTATTGTTCAAATGGGATTTGGCCAAACTTCAAACAGGAACACACCAATACACTCCCCAAGTTTCAACGGTTCAAATCAAGCATCACAAATGAAAATTGAGCTCTAA 1533 0.3568 MENQFFLNAGFEPSMPTWQSLSSAMEIQPTTLLNCSSDQNQDCFFNPNWEKSTDQQNHHFDSSALSSIVSSPISSSPPNENFMMRELIGKLGTFRNSCDEISQHFVKENMQNMNSSVDLGFVERAAKFSCFGSKSFNERSNNQFVMKNNNVEFVQRSVKVMENGKILPRVSSSPSLKTLVSQINNIENKNENGRMEVANSQEESTISEQNTPNGEMGVKVSLDIMNSRKRKASSSKGKASNSSSPKKGVEGSGEESNAKKSKSNEGERNENGGMNMEEDSKEGTTNAGEEKQNKSNSKPIEPLKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRMDLSIESLVSKDVFQSNNSLQNSIFQLDSPAPSFYGQNQAIHNNIPNTTVTHCSVDTLDPSLSQNVGMHLPLLNGFNEAASQYPLTFCEEDLHTIVQMGFGQTSNRNTPIHSPSFNGSNQASQMKIEL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03238 510 MobiDBLite consensus disorder prediction 252 302 - -
Car07g03238 510 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 3 105 IPR024097 GO:0006355
Car07g03238 510 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 134 503 IPR024097 GO:0006355
Car07g03238 510 CDD bHLH_AtBPE_like 305 390 - -
Car07g03238 510 PANTHER BHLH TRANSCRIPTION FACTOR 134 503 - -
Car07g03238 510 PANTHER BHLH TRANSCRIPTION FACTOR 3 105 - -
Car07g03238 510 MobiDBLite consensus disorder prediction 187 216 - -
Car07g03238 510 Gene3D - 312 387 IPR036638 GO:0046983
Car07g03238 510 MobiDBLite consensus disorder prediction 187 302 - -
Car07g03238 510 Coils Coil 362 382 - -
Car07g03238 510 Pfam Helix-loop-helix DNA-binding domain 319 366 IPR011598 GO:0046983
Car07g03238 510 MobiDBLite consensus disorder prediction 487 510 - -
Car07g03238 510 MobiDBLite consensus disorder prediction 236 250 - -
Car07g03238 510 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 315 365 IPR011598 GO:0046983
Car07g03238 510 SMART finulus 321 371 IPR011598 GO:0046983
Car07g03238 510 Coils Coil 176 203 - -
Car07g03238 510 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 313 384 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03238 Car-Chr7 59975440 59979161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03238 1 464 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 42.970 6.24e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car07g03238 HLH 3.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03238 - - gmx:100801233 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00962 03 49695610 49699435 Car07g03238 07 59975440 59979161 PCT