Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03236 ATGGGTATTTCTAGGGATTCTATGCACAAAAGGCGTGCCACTGGTGGCAAGAAGAAGGCATGGAGGAAGAAGAGAAAGTACGAGCTTGGTCGCCAGCCAGCTAACACCAAGCTATCAAGCAACAAAACTGTTAGACGCATTCGTGTTAGAGGGGGCAATGTGAAGTGGAGAGCTCTCAGATTGGATACTGGAAATTTCTCATGGGGAAGTGAAGCTGTCACTCGTAAAACCCGTTTGCTGGATGTGGTTTACAATGCTTCCAACAATGAGCTTGTGCGAACTCAGACCCTTGTGAAGAGTGCTATCGTGCAGGTTGATGCTGCTCCTTTCAAGCAGTGGTATCTTCAACACTACGGTGTTGAAATTGGAAGGAAAAAGAAAACTGCTTCCAAAAAAGATGCACCAGAGGAGGCCGAAGCTGTTACAGAAGAAGCCAAAAAGAGTAACCATGTCCAAAGAAAATTAGAGACACGCCAGAAAGAACGCCAGCTTGATTCCCACATTGAAGAGCAGTTTGGTGGTGGGCGTTTGCTTGCATGCATTTCATCTCGACCTGGTCAATGTGGCAGGGCTGATGGTTACAttcttgaaggaaaagagcttgaattttacatgaagaaactccagaggaAGAAGGGCAAGGGTGCTGCTTGA 654 0.4373 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTASKKDAPEEAEAVTEEAKKSNHVQRKLETRQKERQLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03236 217 MobiDBLite consensus disorder prediction 1 40 - -
Car07g03236 217 Gene3D - 32 160 - -
Car07g03236 217 Gene3D - 161 214 - -
Car07g03236 217 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Car07g03236 217 MobiDBLite consensus disorder prediction 127 166 - -
Car07g03236 217 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car07g03236 217 MobiDBLite consensus disorder prediction 11 26 - -
Car07g03236 217 CDD Ribosomal_S8e_like 5 196 - -
Car07g03236 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 - -
Car07g03236 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car07g03236 217 Pfam Ribosomal protein S8e 5 196 IPR022309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03236 Car-Chr7 59954935 59957572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03236 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 86.408 3.53e-128 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03236 K02995 - gmx:100500112 397.127