Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03235 ATGGACGAAGATTTCGACATCCCGGCGACCGAGCCAATGAACGACGACTTCGACTTCGCCGGCGTCGGTGACGACGAGAATCTGATTCTCAAGGTCGGCGAAGAGAAGGAGATTGGTAAACAAGGCTTGAAGAAAAAGCTTATCAAAGAAGGTGAAGCATGGGAAACCCCCGATGTTGGCGATGAAGTTCAAGTTCACTACACTGGAACGTTGCTTGATGGTACTAAGTTTGATTCCAGCAGAGATAGGGGAACTCCTTTCAAATTCACGCTTGGACAAGGGCAAGTTATCAAAGGATGGGACCTAGGTATTAAAACAATGAAGAAAGGAGAAAATGCCCTTTTCACAATCCCAGCTGAACTGGCTTATGGTGAATCTGGTTCTCCTCCAACTATTCCTCCCAATGCTACTCTCCAGTTCGATGTTGAGCTGCTGTCCTGGACTAGTGTCAAGGATATATGTAAGGATGGAGGATTGTTTAAGAAGATACTTAAGGAGGGGGAGAAATGGGAAAACCCAAAGGATCCTGATGAAGTTTTTGTTAAGTACGAAGCATGTCTTGATGACGGAACACTTGTAGCAAAATCTGATGGTGTGGAGTTCGCAGTCAAGGATGGTCATTTTTGTCCTGCATTGTCAAAGGCTGTTAAGACCATGAAAAAAGGAGAGAAAGTGATCTTGACTGTGAAGCCACAGTATGGATTTGGTGAGAAGGGCAAGCCAGCACATGGTGATGAAGGTGCAGTTCCACCCAATGCAACATTGCAGATTGCTCTCGAGTTAGTTTCTTGGAAGACTGTTTCTGAAGTAACTGACGACAAGAAGGTCATAAAAAAGATCCTCAAAGAAGGGGAAGGATATGAGCGTCCAAATGAGGGAGCTGTTGTGAAATTGAAACTAATTGGTAAGCTGCAAGATGGCACTGTATTTTTGAAGAAGGGCCATAGTGATGATGAAGCCGACCTGTTTGAATTCAAAACAGATGAGGAGCAAGTGATTGATGGGCTGGATAGAGCTGTAATGACCATGAAGAAGGGTGAGGTAGCATCTTTGACCATTGCGCCTGAGTATGCTTTTGGTTCATCAGAGTCTCAGAAGGAATTGGCAGTTGTTCCTCCTAATTCAACCTTGTATTATGAGCTTGAGCTAGTATCATTCGTCAAGGATAAGGAGTCCTGGGACATGAACACTGAAGAAAAGATAGAAGCTGCTGGGAAGAAGAAAGAAGAAGGGAATGCATTGTTTAAAACTgggaaatatgccagagcttctaaaagatatgagaagGCTGTGAAGTACATAGAGTATGATACTTCCTTTAGTGAAGAGCAGAAGAAGAGTGCCAAGGCTTTGAAGGTTGCTTGTAATCTGAACGATGCAGCATGCAAGCTGAAGTTGAAAGACTATAAACAGGCAGAGAAATTGTGCACAAAGGTTCTGGAGCTTGAGAGCACTAGTGTGAAGGCCCTTTATAGAAGGGCGCAGGCATATATTCAGTTGGCTGACTTGGATTTGGCTGAATTTGATATCAAGAAAGCCCTTGAGATTGATCCTGACAACAGGGATGTGAAGCTGGAGTACAAGGTTTTGAAGGAAAAGATGAAGGAGATTAATAAGAAAGATGCAAAATTTTATGGGAATATGTTCAGCAAAATGAAAAAGTTGGATTCACTTGACAATAGCAAATCGGCACCAAAGGATGCGGAACCCATGAGTATTGACAGCAAGGCATAG 1734 0.425 MDEDFDIPATEPMNDDFDFAGVGDDENLILKVGEEKEIGKQGLKKKLIKEGEAWETPDVGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGQVIKGWDLGIKTMKKGENALFTIPAELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGLFKKILKEGEKWENPKDPDEVFVKYEACLDDGTLVAKSDGVEFAVKDGHFCPALSKAVKTMKKGEKVILTVKPQYGFGEKGKPAHGDEGAVPPNATLQIALELVSWKTVSEVTDDKKVIKKILKEGEGYERPNEGAVVKLKLIGKLQDGTVFLKKGHSDDEADLFEFKTDEEQVIDGLDRAVMTMKKGEVASLTIAPEYAFGSSESQKELAVVPPNSTLYYELELVSFVKDKESWDMNTEEKIEAAGKKKEEGNALFKTGKYARASKRYEKAVKYIEYDTSFSEEQKKSAKALKVACNLNDAACKLKLKDYKQAEKLCTKVLELESTSVKALYRRAQAYIQLADLDLAEFDIKKALEIDPDNRDVKLEYKVLKEKMKEINKKDAKFYGNMFSKMKKLDSLDNSKSAPKDAEPMSIDSKA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03235 577 ProSiteProfiles TPR repeat profile. 487 520 IPR019734 GO:0005515
Car07g03235 577 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 293 387 IPR001179 GO:0003755
Car07g03235 577 SUPERFAMILY FKBP-like 270 404 - -
Car07g03235 577 Coils Coil 520 540 - -
Car07g03235 577 SMART tpr_5 404 437 IPR019734 GO:0005515
Car07g03235 577 SMART tpr_5 487 520 IPR019734 GO:0005515
Car07g03235 577 SMART tpr_5 453 486 IPR019734 GO:0005515
Car07g03235 577 PANTHER PEPTIDYLPROLYL ISOMERASE 1 271 - -
Car07g03235 577 PANTHER PEPTIDYLPROLYL ISOMERASE 277 387 - -
Car07g03235 577 PANTHER PEPTIDYLPROLYL ISOMERASE 386 564 - -
Car07g03235 577 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 176 265 IPR001179 GO:0003755
Car07g03235 577 SUPERFAMILY TPR-like 392 552 IPR011990 GO:0005515
Car07g03235 577 MobiDBLite consensus disorder prediction 556 577 - -
Car07g03235 577 SUPERFAMILY FKBP-like 35 153 - -
Car07g03235 577 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 386 564 - -
Car07g03235 577 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 271 - -
Car07g03235 577 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 277 387 - -
Car07g03235 577 SUPERFAMILY FKBP-like 152 268 - -
Car07g03235 577 Gene3D - 151 265 IPR046357 GO:0003755
Car07g03235 577 Gene3D - 266 389 IPR046357 GO:0003755
Car07g03235 577 Pfam Tetratricopeptide repeat 487 520 IPR001440 GO:0005515
Car07g03235 577 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 60 148 IPR001179 GO:0003755
Car07g03235 577 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 56 145 IPR001179 GO:0003755
Car07g03235 577 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 171 261 IPR001179 GO:0003755
Car07g03235 577 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 287 384 IPR001179 GO:0003755
Car07g03235 577 Gene3D Tetratricopeptide repeat domain 390 547 IPR011990 GO:0005515
Car07g03235 577 Gene3D - 35 150 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03235 Car-Chr7 59944828 59949233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03235 29 553 Calmodulin-binding Proteins AT3G25230 84.190 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03235 K09571 - gmx:100803189 991.104