Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03233 ATGAAGCCATTTCCAATTATTCTCCTCTTCGTCATTGCCTCAGCATTAGTTTCGGCGAAGAACACTGGTGATGTAACGGAGTTGCAGATTGGCGTTAAGTATAAACCAACATCATGTGAAGTTCAAGCACACAAAGGTGATAAAGTGAAAGTACACTACCGGGGAAAACTCACTGATGGTACTGTTTTTGATTCAAGCTTTGAAAGAAATAATCCAATTGACTTTGAGCTTGGTAGTGGCCAAGTGATCAAAGGATGGGACCAAGGATTATTGGGAATGTGTCTCGGTGAGAAGCGGAAACTGAAAATACCAGCAAAACTTGGCTACGGAGAGCAGGGCTCCCCACCCACTATTCCAGGGGGTGCAACACTTATATTTGATACCGAGCTTGTGGGAGTGAACGACAAAAGTTTAAGCGAAGAAAAATCAAACTCCGAACTGTAG 444 0.4324 MKPFPIILLFVIASALVSAKNTGDVTELQIGVKYKPTSCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNNPIDFELGSGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDKSLSEEKSNSEL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03233 147 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 40 131 IPR001179 GO:0003755
Car07g03233 147 PANTHER - 7 142 IPR044609 GO:0000413|GO:0003755|GO:0061077
Car07g03233 147 Gene3D - 12 146 IPR046357 GO:0003755
Car07g03233 147 SUPERFAMILY FKBP-like 28 139 - -
Car07g03233 147 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 46 134 IPR001179 GO:0003755
Car07g03233 147 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP15-2 7 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03233 Car-Chr7 59933646 59937450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03233 46 131 Calmodulin-binding Proteins AT3G25230 61.628 3.99e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03233 K09569 - gmx:100499966 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00965 03 49804285 49813727 Car07g03233 07 59933646 59937450 PCT