Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03226 ATGGAAAGGTATAAAATTTTGAGAGAGCTCGGAGATGGTTCTTGCGGTCATGTATATAAAGCCCGTGATATGAGAACTTATGAGATTGTTGCTGTCAAAAGGTTGAAAAGAAAGTTTTGCTTCTGGGAAGAATATACAAATTTAAGAGAAGTTAAGGCCCTCCGTAAAATGAATCACCCAAATATCATAAAGTTGAGAGAGGTTGTTAGAGAAAATAATGAACTGTTTTTCATTTTTGAATACATGGATTTTAATCTTTATCAATTAATAAAAGAGAGAGAAAAGCCCTTGTCAGAGGAAGAGATACGATGCTTTATGAAGCAAGTGCTCCATGGACTTAGTCACATGCACAAGAACGGATTCTTTCATCGGGATTTAAAACCTGAAAATTTGCTGGTGACTAATGACGTTCTTAAAATTGCTGATTTTGGACTGGCTAGAGAAGTATCATCAATGCCTCCATATACTCAATATGTTTCCACACGGTGGTATCGAGCTCCTGAAGTATTGTTGCAGTCTCCACGTTATACTCCTGCTGTTGACATGTGGGCTATTGGTGCTATATTTGCTGAGCTTTTTACTTTGACCCCCATATTTCCTGGTGAAAGTGAAATAGATCAACTGTACAAAATATACTGTGTTCTTGGTATGCCAGATTCAACTTGTTTCACCATAGGTGCGAACAACTCTAGGCTATTGGACCTTGTTGGTCAAGAAGTTGTTCCACCTATGAAGCTTTCTGATATCATTCCAAATGCTAGCATGGAAGCTATAGATTTAATCACACAATTGTTATCATGGGACCCATCAAGAAGGCCAGATGCGGATCAGTCACTGCAACATTCTTTTTTCAATGTGGATACAAGGGTTCCTTGTTCACTCAGTGATCCACTCGAGCTGAAGCTGAGTTGCACGAGGGCAAAACCAAATCTTGAGCTGAAGCTGCAGGATTTTGGCCCTGATCCCGATGATTGTTTTCTTGGCTTGACATTGGCTGTAAAGCCTAGTGTTTCAAACTTGGGTATAGTATTAGTATATCTTAACTATTTATTTACTATAGAAAATAATATGCTCTTTTGCTCGGATTTTAATGATCATTCAGACCAATCAGTTTTTTGGACATTATTATCTCCTGATCAGAGTGGAGTTCACAACTCAGCAGAGACTTCATTATCATTGTCATTTGGATCTGTTCAACACCAGCCAATTGGAGTTCCACAGACAGCGGGATTTTCTTTTCAGCCTTTGCAGCCTAACATCTTAACTACTCCATTTTTGACCCTGTCTTCTCCGTTCCAGCGCGGGCACTGCCTTTGA 1317 0.3926 MERYKILRELGDGSCGHVYKARDMRTYEIVAVKRLKRKFCFWEEYTNLREVKALRKMNHPNIIKLREVVRENNELFFIFEYMDFNLYQLIKEREKPLSEEEIRCFMKQVLHGLSHMHKNGFFHRDLKPENLLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPRYTPAVDMWAIGAIFAELFTLTPIFPGESEIDQLYKIYCVLGMPDSTCFTIGANNSRLLDLVGQEVVPPMKLSDIIPNASMEAIDLITQLLSWDPSRRPDADQSLQHSFFNVDTRVPCSLSDPLELKLSCTRAKPNLELKLQDFGPDPDDCFLGLTLAVKPSVSNLGIVLVYLNYLFTIENNMLFCSDFNDHSDQSVFWTLLSPDQSGVHNSAETSLSLSFGSVQHQPIGVPQTAGFSFQPLQPNILTTPFLTLSSPFQRGHCL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03226 438 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Car07g03226 438 PANTHER CYCLIN-DEPENDENT KINASE F-4 1 320 - -
Car07g03226 438 Gene3D Transferase(Phosphotransferase) domain 1 82 284 - -
Car07g03226 438 CDD STKc_MAK_like 4 284 - -
Car07g03226 438 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03226 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Car07g03226 438 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 320 - -
Car07g03226 438 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03226 438 Gene3D Phosphorylase Kinase; domain 1 4 81 - -
Car07g03226 438 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03226 Car-Chr7 59871561 59878725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03226 1 303 Core Cell Cycle Gene Families AT1G66750 38.608 1.79e-62 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Car07g03226 Pkinase 9.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03226 K08829 K08830 gmx:100792842 774.622