Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03199 ATGGCTGTTCCAAAAGTGAATGTAAAGTTACTTGAAGACCTTGAAATAATGGGATTTCCACATGCAAGGGCAACAAGAGCATTGTATTATTCTGGCAATACCAGCTTAGAGGAAGCTATAACTTGGATGATTGATCATGAGAATGACACTGATATTGATGAGATTCCATTGGTAGATGTAGACATTGATATTATTGATGATAGCTCTCAATCATTCACCATCACAAAAGAAATGAGAATGAAAGCACATAATTTAAGGGAACAAGaaggcaagaggaaaaggaatgaagacaaaatgatggaaagggaaagggaaaagGAGAGGATTCAAGAAGGTAAAAAACTCCTTGAGGCGAAGCGAATCGCAGAAGAAAATGAAAGAAAACGGAATTTATCCTTGagaaaagcagaaaaagaagaagaacaaAGAGCTAGGGAAAACATTCTCAAGAAACTAGAGCAGGATAAGTTAAATAGAAGGTCTATACTTGGATTACCATTAGAAAACCAAGCAACTGTGACATCACCAGCCATTGTAATAAATCAAAAAAAGATTTCAAAGCCTATTTATACAACCACAAAAATTGAACACTTGAGAGAATGTTTGAGGTCTCTCAAACGCGAACACAAGGGTGAGAATGCAAGAATTAGAAGGGCCTTTGAAACACTTCTAGTGTACGTTGGAAATGTTGTCAAGAATCCAAATGAGGAAAAGTACAGGAAAATCAGATTGAGCAATCCATTATTCCAGGATAGAGTTGGAAGTTTGAATGGTGGTGTAGAGTTTCTTGAGCTATGTGGTTTTGAGAGAATGGACGACTTTTTGTATCTTCCTAGTGAAAAGGTTGACATGGAACTACTAAGTTCAGCTGGTTCTGTCTTAAATTCTGCAATCACAAATCCTTTCTTTGGACTTTTAAGTATTTAA 927 0.3323 MAVPKVNVKLLEDLEIMGFPHARATRALYYSGNTSLEEAITWMIDHENDTDIDEIPLVDVDIDIIDDSSQSFTITKEMRMKAHNLREQEGKRKRNEDKMMEREREKERIQEGKKLLEAKRIAEENERKRNLSLRKAEKEEEQRARENILKKLEQDKLNRRSILGLPLENQATVTSPAIVINQKKISKPIYTTTKIEHLRECLRSLKREHKGENARIRRAFETLLVYVGNVVKNPNEEKYRKIRLSNPLFQDRVGSLNGGVEFLELCGFERMDDFLYLPSEKVDMELLSSAGSVLNSAITNPFFGLLSI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03199 308 Pfam UBA/TS-N domain 11 42 IPR015940 -
Car07g03199 308 SMART PGNneu 218 279 - -
Car07g03199 308 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 1 307 - -
Car07g03199 308 Gene3D - 199 297 - -
Car07g03199 308 SUPERFAMILY UBA-like 6 56 IPR009060 GO:0005515
Car07g03199 308 Coils Coil 195 215 - -
Car07g03199 308 Pfam PUB domain 216 283 IPR018997 -
Car07g03199 308 Gene3D - 8 53 - -
Car07g03199 308 SUPERFAMILY PUG domain-like 190 302 IPR036339 -
Car07g03199 308 Coils Coil 85 158 - -
Car07g03199 308 CDD PUB_UBA_plant 202 306 - -
Car07g03199 308 MobiDBLite consensus disorder prediction 82 110 - -
Car07g03199 308 PANTHER F13M7.16 PROTEIN 1 307 - -
Car07g03199 308 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03199 Car-Chr7 59619529 59625981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03199 1 306 C2H2 Transcription Factor Family AT1G04850 57.419 2.79e-100 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03199 K24348 - gmx:100781260 404.06