Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03190 ATGGCTTTTCTAAGTCATAATAATACAAATAATTTCTTCATAGCTATACTCATATTTTGCATCTTTCGTTCATGTTTGAGTTCTAATATCAAAGACACCATTACATCATCTACATCAATAAAAAACCATGAAACAATAACCTCAAACAACACTGATTTCAAGCTAGGATTTATCACCACTTCAATAAATTCAACAAACCTTTACCTAGCAATTTGGTACATCAATGAAACCAACACCATTTGGATTGCTAATAGAGACCAACCTCTCAAAGATTCATCCTATGGTTTTGTCACAATTCACAAGGATGGCAATCTTGTAATAATGAACAAACAAAAGGGTATTAGTGTTATCCTATGGTCAACAAATATTTCATTCTCAAATAGTATCAATTCAACAGCACAACTTGATGATTCAGGAAACTTGATTTTGAGAGACATAAATAGTGGATCAAAAATTTGGGATAGTTTCTCACATCCTGCAGATGCAGCTGTACCAATGATGAGAATTGCTTCTAACAAAGTCACAGGTAAGAAAATAGCTTATGTTTCAAGAAAAAGTGCTTCTGATCCTTCTTCAGGACATTTCACAGCGAGTTTAGAAAGATTGAATGCACCTGAAGTTTTTATTTGGTATGATAATAGTCCTTATTGGAGAACTGGTCCTTGGAACGGACGAGTTTTCCTCGGATCACCAAGAATGCTAACCGAATATTTATTCGGTTGGCGATTAGATCACGACGACGATGGAACTGAATATATAACTTATAATTTTGCTAGCAAAACTGCTTTTGGAATCCTTACTTTGACACCACATGGAACACTTAAGTTGGTTGAGTTTGTTAACAAGAAGGAAATTCTTAGTCTTGAGGTTGATCAAAATGAGTGTGATTTTTATGGAAAATGTGGGCCTTTTGGTAATTGTGATAATTCAACTATACCAATTTGTAGTTGTTTTGATGGTTTTGAGCCTAAAAATTTGGAGGAATGGAATTTGAGAAATTGGACTAATGGTTGTGTGAGAAAAGGAGAATTGAAGTGTGAGATGTTGAAAAATGGATCATCAACTGAATTTAAACAAGATGGATTTTTGGTGTATCATAACATGAAAGTTCCTGATTTTTCAGTGTCTAATAATGCAAAAGTTCCTGATTTTTCTCAAAGATCAGATGGTGACCAAGATAAATGTGGTTCTGATTGTTTGACTAATTGTTCATGTTTGGCTTATGCATATGATCCTTATATTGGTTGCATGTATTGGAGTCGAGAGTTAATTGATTTGCAAAAATTTCCTTACGGAGGAGTCGATCTCTTCATTCGCGTTCCATCAGAATTTGTTGTAGCTAAAAAGGAAAAAAAACACAAGAGTGTTTTAATCGTTGCCATTGCTGGAGTAATAGGAGCATGTATCTTGGTTATATGTGCTTATCTTTTGTGGCGGAAATGTACCGTCAGGCATACAGGAAGCCAACCTCGAAACTTGATTATGAGAGAGCAGAAGCAAATGAAATTGGATGAGTTACCATTGTATGATTTTGAAAAGCTTGAAACTGCTACAAACAACTTTCACTTTGGTACAATGCTTGGGAAGGGAGGTTTTGGTCCTGTATACAAGGGAATAATGGAAGATGGTCAAGAAATTGCTGTGAAAAGACTCTCGAAAACTTCGGGACAAGGATTAGAAGAATTCATGAATGAAGTAGTTGTGATTTCTAAACTTCAACATCGCAATCTTGTAAGACTTCTTGGTTGTTGTGTTGAAAGGGGAGAACAAATGTTGATTTATGAGTTCATGCCAAATAAGAGTTTGGATGCCTTTCTTTTTGATCCACTACAAAAGAAAATTTTAGATTGGAAAAAGCGGTTAACCATAATTGAAGGAATAGCTCGAGGTATACTCTATCTTCATCGAGACTCGAGACTAAGAATTATACATAGAGATCTAAAAGCAAGCAACATATTACTTGATGGCGAGATGATTCCAAAAATATCAGACTTTGGTTTAGCTAGAATTGTTAAAGGTGGAGAAGATGATGAAGCTAACACAAAAAGGGTTGTTGGAACTTATGGTTATATGCCGCCTGAATATGCAATGGAGGGGCTTTTTTCTGAAAAATCAGATGTCTATAGTTTCGGAGTTTTATTGCTAGAGATTGTCAGTGGACGAAGAAATAGTAGCTTTTATCACAGTGAAGATTCACTTAGCCTTGTAGGCTTTGCCTGGAAACTATGGTTAGAAGAAAACATTATATCTTTAATAGATCCAGAGGTATGGGATCCATGCTATGAGAGCAGCATGTTGAGGTGCATACACATAGGACTTCTTTGTGTGCAAGAACTTCCAAGAGAAAGACCAAGTATATCAACTGTAGTTTTAATGCTCATAAGTGAGATTACACATCTTCCTCCTCCAGGAAAAGTTGCATTTGTTCAAAAGCAAAATTCTCGAAGTGCAGAATCTTCTCAAAAAAGTCAATCTAACTCAAACAACAATGTAACTCTGAGTGAAGTCCATGGTAGGTAA 2520 0.3548 MAFLSHNNTNNFFIAILIFCIFRSCLSSNIKDTITSSTSIKNHETITSNNTDFKLGFITTSINSTNLYLAIWYINETNTIWIANRDQPLKDSSYGFVTIHKDGNLVIMNKQKGISVILWSTNISFSNSINSTAQLDDSGNLILRDINSGSKIWDSFSHPADAAVPMMRIASNKVTGKKIAYVSRKSASDPSSGHFTASLERLNAPEVFIWYDNSPYWRTGPWNGRVFLGSPRMLTEYLFGWRLDHDDDGTEYITYNFASKTAFGILTLTPHGTLKLVEFVNKKEILSLEVDQNECDFYGKCGPFGNCDNSTIPICSCFDGFEPKNLEEWNLRNWTNGCVRKGELKCEMLKNGSSTEFKQDGFLVYHNMKVPDFSVSNNAKVPDFSQRSDGDQDKCGSDCLTNCSCLAYAYDPYIGCMYWSRELIDLQKFPYGGVDLFIRVPSEFVVAKKEKKHKSVLIVAIAGVIGACILVICAYLLWRKCTVRHTGSQPRNLIMREQKQMKLDELPLYDFEKLETATNNFHFGTMLGKGGFGPVYKGIMEDGQEIAVKRLSKTSGQGLEEFMNEVVVISKLQHRNLVRLLGCCVERGEQMLIYEFMPNKSLDAFLFDPLQKKILDWKKRLTIIEGIARGILYLHRDSRLRIIHRDLKASNILLDGEMIPKISDFGLARIVKGGEDDEANTKRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYHSEDSLSLVGFAWKLWLEENIISLIDPEVWDPCYESSMLRCIHIGLLCVQELPRERPSISTVVLMLISEITHLPPPGKVAFVQKQNSRSAESSQKSQSNSNNNVTLSEVHGR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03190 839 SMART serkin_6 521 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03190 839 SUPERFAMILY Protein kinase-like (PK-like) 506 820 IPR011009 -
Car07g03190 839 Pfam Protein tyrosine and serine/threonine kinase 522 791 IPR001245 GO:0004672|GO:0006468
Car07g03190 839 Pfam D-mannose binding lectin 79 185 IPR001480 -
Car07g03190 839 Gene3D - 25 157 IPR036426 -
Car07g03190 839 CDD B_lectin 39 159 IPR001480 -
Car07g03190 839 Pfam PAN-like domain 359 426 IPR003609 -
Car07g03190 839 Gene3D Transferase(Phosphotransferase) domain 1 597 800 - -
Car07g03190 839 ProSiteProfiles PAN/Apple domain profile. 346 441 IPR003609 -
Car07g03190 839 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 837 - -
Car07g03190 839 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 21 837 - -
Car07g03190 839 SMART blect_4 37 159 IPR001480 -
Car07g03190 839 ProSiteProfiles Bulb-type lectin domain profile. 31 156 IPR001480 -
Car07g03190 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Car07g03190 839 Pfam S-locus glycoprotein domain 217 325 IPR000858 GO:0048544
Car07g03190 839 ProSiteProfiles EGF-like domain profile. 291 327 IPR000742 -
Car07g03190 839 MobiDBLite consensus disorder prediction 810 839 - -
Car07g03190 839 SMART ntp_6 357 440 IPR003609 -
Car07g03190 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 224 IPR036426 -
Car07g03190 839 CDD STKc_IRAK 527 793 - -
Car07g03190 839 ProSiteProfiles Protein kinase domain profile. 521 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03190 839 Gene3D Phosphorylase Kinase; domain 1 495 596 - -
Car07g03190 839 PIRSF SRK 5 839 IPR024171 GO:0004674
Car07g03190 839 CDD PAN_AP_plant 359 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03190 Car-Chr7 59517792 59523734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03190 469 834 Receptor kinase-like Gene Family AT4G23150 52.589 7.85e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car07g03190 PK_Tyr_Ser-Thr 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03190 - - mtr:MTR_8g013600 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03190 07 59517792 59523734 Car07g03190 07 59517792 59523734 ECH