Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03189 ATGGAGGGTCGCCGGAGAATAACGCTTTACGATCAAATGAAATCGGGTAACACAAGCAACAATCGAAGTTCACTTGCAAGTTTAATCCTCAACGACGCCGTTTTAACCAACCAGAAAACCCCAAACCAAACACTCTTAGACATTATACAAGAACACGAACCAAACAACGTTGTTAACAACAACAATAACACGAAGGATCGAAAATCGTGGAAAGCGTTTAAAGAGTTACTTCGTCTAAAGCGTCATAACTCGGACGAGTCGACTCACCAGCAACATAACGAGTCCGACGCCGTTGGAGAAGATCCTGGAAATTCGAATCCGCCGGAATTTCTTGCCGGTGGAGTTGCCGGCGGCGAGTCCTCCGACGAGGAGGAGAATAATACCGTTAACAATTCGGAGACGGTGCAGGGTAGCATGTCGCTGATGGATTTGTTGGAGGAAACGGAAGTTGATTTGgatggaagcagtgatgtggatgatggtgatgacgtggacgatgaatATTATAAAAAACGAGTGgaagaagaagaagaggaaggagaaggagaagggaaTGTTCCGGTGGAACACAATTGCTGCGTGTGTATGGTGAGGCATAAAGGTGCAGCGTTTATACCGTGTGGACACACATTTTGCAGGATGTGTTCAAGAGAGATTTGGGTGAGTAGAGGGAATTGTCCACTTTGCAATAATTCTATATTGGAAATTCTTGATATTTTCTGA 723 0.3956 MEGRRRITLYDQMKSGNTSNNRSSLASLILNDAVLTNQKTPNQTLLDIIQEHEPNNVVNNNNNTKDRKSWKAFKELLRLKRHNSDESTHQQHNESDAVGEDPGNSNPPEFLAGGVAGGESSDEEENNTVNNSETVQGSMSLMDLLEETEVDLDGSSDVDDGDDVDDEYYKKRVEEEEEEGEGEGNVPVEHNCCVCMVRHKGAAFIPCGHTFCRMCSREIWVSRGNCPLCNNSILEILDIF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03189 240 MobiDBLite consensus disorder prediction 121 135 - -
Car07g03189 240 MobiDBLite consensus disorder prediction 82 135 - -
Car07g03189 240 PANTHER OS01G0917900 PROTEIN 120 240 - -
Car07g03189 240 PANTHER OS01G0917900 PROTEIN 2 97 - -
Car07g03189 240 Pfam Zinc finger, C3HC4 type (RING finger) 189 234 - -
Car07g03189 240 SUPERFAMILY RING/U-box 191 236 - -
Car07g03189 240 CDD RING-HC 192 229 - -
Car07g03189 240 PANTHER OS01G0917900 PROTEIN 120 240 - -
Car07g03189 240 PANTHER OS01G0917900 PROTEIN 2 97 - -
Car07g03189 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 240 IPR013083 -
Car07g03189 240 ProSiteProfiles Zinc finger RING-type profile. 192 230 IPR001841 -
Car07g03189 240 SMART ring_2 192 229 IPR001841 -
Car07g03189 240 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03189 Car-Chr7 59493237 59494339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03189 4 240 C3H Transcription Factor Family AT3G25030 34.074 5.54e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03189 - - cam:101511225 432.95