Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03179 atgacacaaacaacctcttcagaaacaaccgcaacaacaaccacaaGTTGTTGCAACTCCTCCACGTCTTCCACTTCTTCACATTCAACCCAAAACCAAAGCCCAACAAAAAAGCCCAAAAGGCCCAAACTGGACAACAAACACCCAACCTACCACGGCGTTAGGAAACGCAATTGGGGTAAATGGGTATCCGAAATTCGCGAACCAAGAAAGAAATCACGAATTTGGCTTGGAACATTCTCAACACCAGAAATGGCAGCAAGAGCACACGACGTAGCAGCTTTAACAATTAAAGGAAAAACCGCAATTCTTAATTTTCCAAATATAGCTGAAATGTTACCTAGACCTGCCACGTCAGCACCACGTGACATTCAAgctgctgcaactgctgctgcttctATGGTTAATTTGGACCCACCTGCCGTGCACGTGACTTCTACTCCGTCTTGTTCTGACTCTGAAGAAGAACTTGGTCAGATTGTTGAACTTCCTAGAATTGAAGAAGGTGAAGATGACTCGGTTGACTCGGCTGCTGAGTTTGTTTTACTTGACTCGGTTGATACTGATGGTAATTGGCTTTGTCCAGCTACACCAATTGGGTTTGAAGGAATTGAATTCTATGCCACTTATTCTGATGAGTTTTTGTTACCCTTTTGGGATTGA 663 0.3876 MTQTTSSETTATTTTSCCNSSTSSTSSHSTQNQSPTKKPKRPKLDNKHPTYHGVRKRNWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGKTAILNFPNIAEMLPRPATSAPRDIQAAATAAASMVNLDPPAVHVTSTPSCSDSEEELGQIVELPRIEEGEDDSVDSAAEFVLLDSVDTDGNWLCPATPIGFEGIEFYATYSDEFLLPFWD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03179 220 MobiDBLite consensus disorder prediction 1 56 - -
Car07g03179 220 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
Car07g03179 220 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Car07g03179 220 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Car07g03179 220 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 11 213 - -
Car07g03179 220 MobiDBLite consensus disorder prediction 1 37 - -
Car07g03179 220 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 213 - -
Car07g03179 220 CDD AP2 51 108 IPR001471 GO:0003700|GO:0006355
Car07g03179 220 Pfam AP2 domain 50 99 IPR001471 GO:0003700|GO:0006355
Car07g03179 220 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
Car07g03179 220 Gene3D AP2/ERF domain 50 108 IPR036955 GO:0003700|GO:0006355
Car07g03179 220 SUPERFAMILY DNA-binding domain 50 107 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03179 Car-Chr7 59341704 59342862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03179 19 187 AP2-EREBP Transcription Factor Family AT5G11590 53.763 1.60e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car07g03179 AP2 3.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03179 K09286 - gmx:100801780 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03179 07 59341704 59342862 Car07g03179 07 59341704 59342862 ECH