Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03176 ATGGAAGCACCAGATTACTTTGTCGGTGGCTATTATGGTGTCGGAGGAGTTGATCAATTCTCGCCGGAGAAACGTCACAGCGGAGACCAGAAGCCTTGTGAGCCTTTCGCCATTGATGACCTCCTTGATTTCTCCAATGCCGACGCAATTATGTCCGACGGTTTTTTTGACAATGTCGCCGGAAATTCCACCGACTCTTCCACCGTCACCATCGTTGACAGCTGTAATTCGTCAGCTTCCGGTGGCGATAATCGCTTCGCAGGCACTATTGTTCCGTATGGTTTCGCCGGCGATGTTCAACACGCCGGAGAACTCTGTGTTCCGTACGACGAAATGGCGGAATTGGAATGGCTTTCGAATTTCGTGGAAGATTCATTCTCCGCCGAAGAGGAATTGAAAACATTGCAACTTCTCTCAGGCGCCGGGGCCGTTAAACCACAGACTCCGGAATCATCATCTTCCACCGACACACTCCCTTCGTTTTCCACCGACGAAACCGCTCGAAACGCATCGTTTCTCCGGCCAGAAACACCTCTCCCAGGGAAAGCACGCAGCAAGCGCTCACGCGCGGCACCAGGAGATTGGTCCACGCGCCTACTTCATCTTCCCGACGCGCCGCCGTCAGAGACTAAAATTGCACTTGTGAAGAAGCGTGAGGATCCGAATGTGGAGTGTTCGGGACGGAAATGTCTGCATTGCGGCGCTGATAAGACGCCACAGTGGCGAACGGGACCGATGGGACCTAAAACGCTGTGCAATGCGTGTGGCGTTAGGTTTAAGTCCGGCAGGTTGGTGCCGGAATATCGACCGGCGGCGAGTCCTACGTTCATTTCGGCGAAACATTCAAATTCGCATAGGAAAGTTTTGGAACTAAGGAGGCAGAAAGAGATGCAAAGACAACAGCATCAACAAATTCTAACTCACAATTCAATTTTCGGTGTATCCAACGGTGGAGAAGACTtcatcaattatcatcatcgtcatcatTGTGGGCCAGAGTTTAGGCATGTTATCTAG 1017 0.5044 MEAPDYFVGGYYGVGGVDQFSPEKRHSGDQKPCEPFAIDDLLDFSNADAIMSDGFFDNVAGNSTDSSTVTIVDSCNSSASGGDNRFAGTIVPYGFAGDVQHAGELCVPYDEMAELEWLSNFVEDSFSAEEELKTLQLLSGAGAVKPQTPESSSSTDTLPSFSTDETARNASFLRPETPLPGKARSKRSRAAPGDWSTRLLHLPDAPPSETKIALVKKREDPNVECSGRKCLHCGADKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFISAKHSNSHRKVLELRRQKEMQRQQHQQILTHNSIFGVSNGGEDFINYHHRHHCGPEFRHVI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03176 338 MobiDBLite consensus disorder prediction 145 170 - -
Car07g03176 338 PANTHER GATA TRANSCRIPTION FACTOR 9 1 338 - -
Car07g03176 338 PIRSF Txn_fac_GATA_plant 22 316 IPR016679 GO:0003677|GO:0005634|GO:0045893
Car07g03176 338 ProSitePatterns GATA-type zinc finger domain. 230 255 IPR000679 GO:0006355|GO:0043565
Car07g03176 338 SMART GATA_3 224 274 IPR000679 GO:0006355|GO:0043565
Car07g03176 338 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 227 288 - -
Car07g03176 338 Pfam GATA zinc finger 230 263 IPR000679 GO:0006355|GO:0043565
Car07g03176 338 ProSiteProfiles GATA-type zinc finger domain profile. 224 260 IPR000679 GO:0006355|GO:0043565
Car07g03176 338 PANTHER GATA TRANSCRIPTION FACTOR 1 338 - -
Car07g03176 338 CDD ZnF_GATA 229 280 IPR000679 GO:0006355|GO:0043565
Car07g03176 338 Gene3D - 225 307 IPR013088 GO:0006355|GO:0008270
Car07g03176 338 MobiDBLite consensus disorder prediction 143 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03176 Car-Chr7 59297528 59299110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03176 34 338 C2C2-Gata Transcription Factor Family AT4G32890 47.962 1.98e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Car07g03176 GATA 1.9e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03176 - - cam:101510199 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03176 07 59297528 59299110 Car07g03176 07 59297528 59299110 ECH