Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03170 ATGCCGGAGCTTCGTAGCGGAGCGCGCCGGGGTCGGCCAACGAAGAAACAACAAGAAACAAaacagcacaagcaagttcatcaaagtccggttgcaggggaggccattgcaacccggacgagacggcggcgtgcagctgcagcggctgctaacaataacgttgaggaggcggcggttgtggctgtaaacgatgacgtagtggttgctgcggcggAGAAAGAAAATCATATAATTGAGGAAGAAAATTTGAAAGAAGCCGTTGGAGCAGAGAAGGAAGAGATAGGGGAGAAACAAATGGACGAGTTTGACAGTGGAGCTCGTAGCAATGATAAATCCAATGCGGGTGAAGACGATACTAACGCCTTTGTTATTCCCGAACAGGTTCAAGTTGGTCAGTCTCCTATCTATAAAACAGAGAAAAAACTTGGAAAGGGTGGATTTGGTCAAGTATATGTTGGTCGGCGTGTTTCTGGTCTACATTTGAGCGAGAAAACTGGACCTAAAGCTATAGAGGTTGCAATAAAATTTGAGCACAGAAGTAGTAAAGGATGTAACTATGGACCACCGAATGAGTGGCAAGTGTACAACACTCTTGGTGGAAGTCATGGTGTGCCACAGGTACATTTCAAGGGCAAGCAAGGTGATTATTTCATCATGATTATGGATATTCTCGGACCTAGCTTGTGGGATGTTTGGAATAATAACTCTCACACCATGTCTACTGAAATGGTTGCTTGTATAGCCATTGAAGCGATATCCATATTGGAGAAGATGCACTCCCGAGGGTATGTACATGGAGATGTGAAGCCGGAAAATTTTCTGCTTGGTGCTCCTGGGACACCTGACGAGAAAAAATTGTTCTTGGTAGATCTTGGTTTAGCTACTAAATGGCGGGATAGTGCAACAGGTTTGCACGTGGACTACGACCAAAGACCCGATGTTTTCAGAGGCACAGTCCGCTATGCAAGTGTGCATGCCCATTTGGGGAGAACTGGAAGCAGGAGGGATGATTTGGAATCTCTTGCATATACACTGATTTTTCTTCTTCGAGGCCGTCTTCCTTGGCAAGGTTACCAGGGAGAAAACAAAGGATATCAGGTTTGCAGGAAGAAAATGGGAACAGCTCCAGAGAACCTATGTTGTTTTTGTCCCCAGCCTTTTAAAGAGTTTGTGGAACATGTAGTGAACTTAAAGTATGATGAAGAGCCTAACTATGCTAAATACATTTCTCTTTTTGATGGAATTGTTGGTCCAAACCCAGATATtaggccacttaatacagaaggtgcacaaaagCTTGTTGGTCATAAAAGAGGCCGATTGTCTACAGATGAAGATGACGATGAACAACCCAAAAAGAAGGTTCGAATGGGTTTGCCAGCGAGTCAGTGGATTAGTGTTTACAATGCCCGTAGACCGATGAAACAAAGGTATCACTACAATGTGTCAAGTTCAAGGTTACTGCAGCACATTGACAAAGGAAATGAGGATGGTTTATTTGTTAGCAGTGTTGCTTCATCTCAGGACCTATGGGCCTTAGTCATGGATGCGGGGACAGGTTTTACTTCCCAAGTTTATGAACTCTCCCCCCAATTTTTCCATAAGGAATGGATCATGGAGCAGTGGGAAAAAAATTACTATATCAGTGCAGTTGCAGGAGTTGAAAATGGAAGTTCACTAGTAGTAATGTCTAAAGGCACCCAGTATTTGCAGCAATCATACAAAGTTAGTGATTCATTTCCTTTCAAATGGATTAACAAAAAGTGGAGGGAGGGCTTTTATGTAACTTCAATGGCCACGGCAGGGTCCAGATGGGGAGTAGTAATGTCTTATGGGGCAGGGTTTTCCGACCAGGTGGTTGAACTAGATTTTCTGTATCCTAGTGAAGGGATTCACAAGCGTTGGGAGTGTGGATACCGAATCACATCGACTGCAGCAACTTGGGACCAAGCCGCTTTTATTTTGAGTATTCCAAGGAGGAAGCCCCAAGACGAAAGTCAGGAAACACTAAGGACCACTGCTTTTCCTAGTACGCATGTTAAGGAAAAGTGGGCAAAGAATCTCTACATTGCAGCAATTTGCCATGGACGTACTGTTTCTTGA 2103 0.3966 MPELRSGARRGRPTKKQQETKQHKQVHQSPVAGEAIATRTRRRRAAAAAANNNVEEAAVVAVNDDVVVAAAEKENHIIEEENLKEAVGAEKEEIGEKQMDEFDSGARSNDKSNAGEDDTNAFVIPEQVQVGQSPIYKTEKKLGKGGFGQVYVGRRVSGLHLSEKTGPKAIEVAIKFEHRSSKGCNYGPPNEWQVYNTLGGSHGVPQVHFKGKQGDYFIMIMDILGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGAPGTPDEKKLFLVDLGLATKWRDSATGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGYQVCRKKMGTAPENLCCFCPQPFKEFVEHVVNLKYDEEPNYAKYISLFDGIVGPNPDIRPLNTEGAQKLVGHKRGRLSTDEDDDEQPKKKVRMGLPASQWISVYNARRPMKQRYHYNVSSSRLLQHIDKGNEDGLFVSSVASSQDLWALVMDAGTGFTSQVYELSPQFFHKEWIMEQWEKNYYISAVAGVENGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTSMATAGSRWGVVMSYGAGFSDQVVELDFLYPSEGIHKRWECGYRITSTAATWDQAAFILSIPRRKPQDESQETLRTTAFPSTHVKEKWAKNLYIAAICHGRTVS 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03170 700 ProSitePatterns Protein kinases ATP-binding region signature. 142 175 IPR017441 GO:0005524
Car07g03170 700 Gene3D Transferase(Phosphotransferase) domain 1 97 457 - -
Car07g03170 700 SUPERFAMILY Protein kinase-like (PK-like) 136 416 IPR011009 -
Car07g03170 700 Pfam Protein kinase domain 136 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03170 700 MobiDBLite consensus disorder prediction 1 23 - -
Car07g03170 700 MobiDBLite consensus disorder prediction 95 114 - -
Car07g03170 700 ProSiteProfiles Protein kinase domain profile. 136 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03170 700 CDD STKc_CK1 136 412 - -
Car07g03170 700 PANTHER CASEIN KINASE 1-LIKE PROTEIN HD16 ISOFORM X1 89 674 - -
Car07g03170 700 PANTHER CASEIN KINASE-RELATED 89 674 - -
Car07g03170 700 SMART serkin_6 136 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03170 700 MobiDBLite consensus disorder prediction 95 118 - -
Car07g03170 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Car07g03170 700 MobiDBLite consensus disorder prediction 1 55 - -
Car07g03170 700 MobiDBLite consensus disorder prediction 435 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03170 Car-Chr7 59175865 59183257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03170 231 412 MAP Kinase Kinase Kinase AT5G50180 23.913 8.94e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Car07g03170 Pkinase 4.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03170 - - gmx:100799630 1140.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03170 07 59175865 59183257 Car07g03170 07 59175865 59183257 ECH