Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03165 ATGTATAGAATAATATCCACGCCGGCGTCAAAGTTCCGCCAATTCCGGCGACTCCGTTCTCGACCTAACATCAAAGCGTCGAGCGACGAGGATCACGCGTCACACATTCTATGGCGGTACCAGATCCTGGACCCAGACAGCGAGTTCGTTGCTTATTGGAACAAAGTTTTCCTTGTGACGAGTCTCCTTGCATTATTTATAGACCCTTTTTACTTCTTCCTCCCCACCGTTGGTGGACCTGCTTGCTTGACTGCAGACCCCAAACTCAGCATCTTCATCACCATCCTCCGCTCTTTCGCTGATCTTTTCTATTGCCTCcatatggccatgaagtttcgtactgccttcgttgctcccaattctagaatcgtcggtcgcggtgaacttgttatggatccccgccaaatagctttgcgttatttgaagtccgattttgtcattgaccttgctgccaccattccattgccccagattgttatttggttagtcattccagctagtagtggctcaaaagctgatcatgccaacaacactcttgcacttttggttctaattcaatacgtaccaaggctctttctcatctttcctttgaaccagcgtattcagaaaacaactggtgtgatagctaaaactccctggattggtgctgcatacaatctcgtcctctacatgctagctagccatGTTACTGGAGCAACTTGGTACCTATCTTCAATAGGTAGACAATTCAATTGCTGGAAAACACAATGCCAGCAGGAAAATAGATCGCATTCTCTTATTTGCATGAATACTTTTCTGGACTGTAATAGTTTGGAAATCCCTGAAAGAAAATATTGGATAAATGTCACACGTGTTGTTAGCAAGTGCGATGCAAAGAGCAAGATCAACATCAAATACAAGTTTGGGATGTTTGCTGATGCTTTCCTCAATGATGTTGTCACTACTAGTTTCAAGGAAAGATACTTCTATTGTCTTTGGTGGGGTTTAAGAAATTTAAGTTCCTACGGACAGAATTTGGACACCACCACATACCTTTTGGAGACACTTTTTTGCATCATCTTATGCATTGCTGGATTAGTTCTCTTTTCACTTTTGATTGGAAACATGCAGACATACTTGCAATCCATGTCAGTTAGGCTAGAAGAATGGAGGATTCGAAAAAGAGATACAGAGGAGTGGATGAGGCATCGTCAGTTACCACAAGATTTGCAAGCACGTGTTCGTCGCTTCGTTCAATATAAATGGCTAGCAACAAGAGGAGTAAATGAAGAGGCCATACTACTTTCCTTACCTTTGGATCTTCGCCGTGAAATTCAACATCACTTGTGTCTCTCTCTAGTGCGACGTGTCCCATTCTTCTCACAAATGGATGATCAGTTACTTGATGCCATATGTGAACGACTAGTGTCATCATTAAGCACAGAAGGAACTTACATATTTAGAGAGGATGATCCTGTAGATGAAATGTTGTTTATCATTAGAGGGACATTGGAGAGCTCTACAACCAATGGAGGAAGGTTTGGATTTTTCAATTCAATCACACTAAGACCTGGAGACTTCTGTGGAGAAGAATTGTTGACATGGGCTTTATTACCAAACTCAACACTCAACTTACCTTCCTCTACTCGTACTGTAAAAGCTCTTACTGAAGTAGAAGCTTTTGCACTACAAGCAGAGGATCTAAAATTTGTGGCAAGTCAATTTAAGCGCCTTCATAGCAAAAAACTTCAGCATGCTTTTAGGTATTATTCACAACAATGGAGAACATGGAGTGCTTGCTTCATACAAGCAGCATGGAGAAAGCATCAGAAAAGGAAGGCAACAAGGGAGTTGTCAATTAAAGAGGGTCTGTACTATGTGGGGGATCCTGAGATTGAAGGATCATCAGGGAATGTGAAAAACTTTAATAATCTTGGTGCCACTGTTTTGGCCTCAAAATTTGCTGCCAATACAAGGAGAGCGAACAATAAGATTCAAGATATTAATCCTGTGCCGCAGTTATTCAAACCTGATGAACCCGATTTCTCTTTAGACCACGATGATGTTTAG 2049 0.3407 MYRIISTPASKFRQFRRLRSRPNIKASSDEDHASHILWRYQILDPDSEFVAYWNKVFLVTSLLALFIDPFYFFLPTVGGPACLTADPKLSIFITILRSFADLFYCLHMAMKFRTAFVAPNSRIVGRGELVMDPRQIALRYLKSDFVIDLAATIPLPQIVIWLVIPASSGSKADHANNTLALLVLIQYVPRLFLIFPLNQRIQKTTGVIAKTPWIGAAYNLVLYMLASHVTGATWYLSSIGRQFNCWKTQCQQENRSHSLICMNTFLDCNSLEIPERKYWINVTRVVSKCDAKSKINIKYKFGMFADAFLNDVVTTSFKERYFYCLWWGLRNLSSYGQNLDTTTYLLETLFCIILCIAGLVLFSLLIGNMQTYLQSMSVRLEEWRIRKRDTEEWMRHRQLPQDLQARVRRFVQYKWLATRGVNEEAILLSLPLDLRREIQHHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLSTEGTYIFREDDPVDEMLFIIRGTLESSTTNGGRFGFFNSITLRPGDFCGEELLTWALLPNSTLNLPSSTRTVKALTEVEAFALQAEDLKFVASQFKRLHSKKLQHAFRYYSQQWRTWSACFIQAAWRKHQKRKATRELSIKEGLYYVGDPEIEGSSGNVKNFNNLGATVLASKFAANTRRANNKIQDINPVPQLFKPDEPDFSLDHDDV 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03165 682 CDD CAP_ED 452 583 IPR000595 -
Car07g03165 682 Gene3D Helix hairpin bin 376 443 - -
Car07g03165 682 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 31 677 - -
Car07g03165 682 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 31 677 - -
Car07g03165 682 SMART cnmp_10 452 583 IPR000595 -
Car07g03165 682 SUPERFAMILY Voltage-gated potassium channels 44 374 - -
Car07g03165 682 Pfam Ion transport protein 52 379 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car07g03165 682 ProSiteProfiles cAMP/cGMP binding motif profile. 452 582 IPR000595 -
Car07g03165 682 Pfam Cyclic nucleotide-binding domain 475 563 IPR000595 -
Car07g03165 682 SUPERFAMILY cAMP-binding domain-like 382 577 IPR018490 -
Car07g03165 682 Gene3D - 56 375 - -
Car07g03165 682 Gene3D Jelly Rolls 450 570 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03165 Car-Chr7 59059484 59062539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03165 36 682 Ion Channels AT5G14870 68.289 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03165 K05391 - gmx:100802812 1210.28