Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03158 ATGATTATTATAGGAAAACCCCATTTGAAGTTGCTTCAGTTGCTTCTCTTTCTGTTATACCTTCATTTCAATGGAATCAGTTCTTATCAAATGGCACCAATGAATTGTACAGACACAAGCCGTGTCTGCACTTCTTTCTTGGCCTTTAAGCCTCAAAAAACCCAATCACTTGAAGTGATTCAAAGCATGTTTGATGTGTTGCCAGGTGACATCACAGTTGAAGGAAATGGTTGGGATTACATATTCATAAGGAAGAACTGTTCTTGTGCAGCTGGTATAAAGAAATATGTGTCTAACACCACCTTTACTGTGAAATCAAATAAAGGGTTGGTGGATGATTTGGTTATGGATGCCTATGATGGGCTTATTTTGCTTCCTAACACCTCAAGGAGGGCAAGGAATGGTGCTGTTATATCATTGAGGTTGTTTTGTGGTTGTTCTAGTGGATTATGGAACTATCTTTTGAGTTATGTGTTGAGAGATGGGGATAGTGTTGAATCTTTGGCAAGTAGATTTGGGGTTAGTATGGATAGTATTGAAGCTGTGAATGGCCTTGATGGTCCTGATAATGTTACTGTTGGTTCACTTTATTATATTCCTCTTGATTCTGTTCCTGGTGATCCTTTTCCTCCAAACCAtgcttctccaccggcttctgttcctgctccttctGTTGATAATATTTCAGATGATCAGGTCAATCATAAGTATCATGTACCCTATGGATGGATCATTGGTGGCTTAGGAGTTGGTCTTATTCTGATAATATTAAGCATAATTCTCTGCGTTTGCCTCAGATCATCGAATTGTTTATCCGAGTCGCGAAGTCATGAAAAAGATGCTGATGGAAAAGTCTCTCATAAATTCCAAATTCTTCGGAATCCAAGTTTCTTTTGTGGTTCTGGAAGGTACATATGTGGCAAACATGTTGACCAGAAGCAAAGAGATGGTGACTCCAGCAATCACACGATTACCGTTCCCAAAGCTTCGACTCTAGGGCCTGACGTATTTGACATGGATAAGCCTGTAGTTTTTTCATACGACGAGATTTTTTCCTCGACTGATGGCTTCTCTGATTCAAATCTACTTGGGCATGGAACATACGGATCTGTCTACTATAGCCTCGTTCGTGACCAGGAAGTTGCTATTAAAAGAATGACAGCTACAAAAACAAAAGAATTTACGTCAGAGGTTAAAGTTTTGTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATTGGCTATGCAGCTAGTCACGATGAGCTTTTCCTAGTTTATGAGTATGCTCAGAAGGGTTCACTCAGAAGCCATTTGCATGATCCTCAAAATAAGGGTCATTCACCACTTTCATGGATAATGAGGGTCCAGATTGCACTTGATGCTGCTAGGGGACTTGAATATATACATGAGCACACAAAAGCTCATTATGTCCACCGTGATATCAAGACGAGCAACATTTTACTTGATGCTTCCTTTAAAGCAAAGATATCAGATTTTGGGTTGGCGAAACTTGTGGGGATAACAAACGAGGGAGAAGTTTCAACTACCAAAGTTGTTGGTACATATGGATATCTTGCTCCGGAATACTTGAGCGACGGCCTTGCAACCACCAAAAGTGATGTCTATGCATTTGGCGTTGTCCTTTTTGAGATTATAACTGGAAAAGAAGCCATTATTCGAACAGAAGGCATGATGACTAAAAATCCCGAAAGACGCTCACTCGCATCAGTAATGTTGGCAGTTCTAAGGAACTCACCTGATTCCATGAGCATGTCAAGCATGAGAGATTACATTGATTCAAATATGATGAATCTGTTTCCCCATGATTGTGTATTTAAGATGGCTATGCTGGCAAAGCAATGTGTGGATGACGATCCCATCTTACGACCCGACATGAAACAAGTAGTGATTTCCATCTCACAGATTCTTCTATCTTCTATTGAGTGGGAAGCAACACTAGCCGGGAATAGCCAAGTATTCAGTGGACTTGTTCAGGGAAGATAG 2004 0.3952 MIIIGKPHLKLLQLLLFLLYLHFNGISSYQMAPMNCTDTSRVCTSFLAFKPQKTQSLEVIQSMFDVLPGDITVEGNGWDYIFIRKNCSCAAGIKKYVSNTTFTVKSNKGLVDDLVMDAYDGLILLPNTSRRARNGAVISLRLFCGCSSGLWNYLLSYVLRDGDSVESLASRFGVSMDSIEAVNGLDGPDNVTVGSLYYIPLDSVPGDPFPPNHASPPASVPAPSVDNISDDQVNHKYHVPYGWIIGGLGVGLILIILSIILCVCLRSSNCLSESRSHEKDADGKVSHKFQILRNPSFFCGSGRYICGKHVDQKQRDGDSSNHTITVPKASTLGPDVFDMDKPVVFSYDEIFSSTDGFSDSNLLGHGTYGSVYYSLVRDQEVAIKRMTATKTKEFTSEVKVLCKVHHANLVELIGYAASHDELFLVYEYAQKGSLRSHLHDPQNKGHSPLSWIMRVQIALDAARGLEYIHEHTKAHYVHRDIKTSNILLDASFKAKISDFGLAKLVGITNEGEVSTTKVVGTYGYLAPEYLSDGLATTKSDVYAFGVVLFEIITGKEAIIRTEGMMTKNPERRSLASVMLAVLRNSPDSMSMSSMRDYIDSNMMNLFPHDCVFKMAMLAKQCVDDDPILRPDMKQVVISISQILLSSIEWEATLAGNSQVFSGLVQGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03158 667 Pfam LysM domain 157 194 IPR018392 -
Car07g03158 667 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 34 667 IPR044812 GO:0019199|GO:0045087
Car07g03158 667 ProSiteProfiles LysM domain profile. 155 199 IPR018392 -
Car07g03158 667 SUPERFAMILY LysM domain 156 200 IPR036779 -
Car07g03158 667 Gene3D Phosphorylase Kinase; domain 1 333 428 - -
Car07g03158 667 CDD LysM 156 199 IPR018392 -
Car07g03158 667 Gene3D LysM domain 152 206 IPR036779 -
Car07g03158 667 PANTHER BNAA06G02020D PROTEIN 34 667 - -
Car07g03158 667 SMART serkin_6 357 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03158 667 SMART LysM_2 156 200 IPR018392 -
Car07g03158 667 Pfam Protein tyrosine and serine/threonine kinase 361 636 IPR001245 GO:0004672|GO:0006468
Car07g03158 667 ProSitePatterns Protein kinases ATP-binding region signature. 363 384 IPR017441 GO:0005524
Car07g03158 667 Gene3D Transferase(Phosphotransferase) domain 1 430 653 - -
Car07g03158 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Car07g03158 667 ProSiteProfiles Protein kinase domain profile. 357 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03158 667 SUPERFAMILY Protein kinase-like (PK-like) 336 637 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03158 Car-Chr7 58827406 58832866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03158 33 667 Receptor kinase-like Gene Family AT1G51940 68.429 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Car07g03158 PK_Tyr_Ser-Thr 2.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03158 - - gmx:100796989 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03158 07 58827406 58832866 Car07g03158 07 58827406 58832866 ECH
Car01g02745 01 52843758 52847024 Car07g03158 07 58827406 58832866 PCT