Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03155 ATGGGAAAAGCTAGCAGGTGGTTGAAGAGTTTGTTAGGGAAGAAGAAGGAGAAGGACCACAATGACAATTCAGGTTCATTGACACCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCTAAGCAAGGGAAGGAAGTGATGGTGGTTGAATCACCTAATATTACTCCAACTTCAACTCATGATACTTCTTGGCTTAGATCCTATGTTTCTGATTCGGAGAATCAACAAAACAAACAtgcaattgctgttgcagctgccacagccgccgctgcagatgctgccgtggcggctgcacaggctgctgttgcagttgtGAGACTCACAAGTCAAGGTAGAGGTACATTGTTCAGTGGAAGTAGGGAGAAATGGGCTGCTGTAAAGATCCAAACTTTCTTTAGAGGCTATTTGGCACGGAAGGCTCTTAGAGCATTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGCTATCTAGTTAGAAAAAGAGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACTTCTGTTAGAACACAGCGAGCTCGTCGATCCATGAGCAAAGAAAATAGATTTCTACCAGAAGTTCTTGCAAGAAAATCTTTGGAACGATTTGATGAAACAAGGAGTGAATTCCACAGCAAAAGGGTACCTACATTATATGAAACATCAATGAATGGATTTGATGATCAAAGTCCAAAAATTGTTGAAATTGATACATACAAAACCAGATCAAAGTCAAGGCGATTTACATCAACAATGTCTGAATGTGGAGAAGACTTACCACATTGTCATGGAATCTCATCTCCTCTTCCTTGTTCGATCCCCGGTCGAGTCTCGGTCCCCGATCATTGCAGACATGTTCAACAAGACTTTGATTGGTATTTCAATGTTGAAGAATGTAGGTTCCCTACAACAGCACATAACACACCACGTTTCAACAATTCTTCTATGCGTCCAAACAACAATGGTTTAGGTACACCATCTAAGAGTGTTTGTGGTGACACTTTCTTTAGATCTTATTACTCAAATTTCCCTAATTACATGGCTAATACTCAATCATTTAAGGCAAAGTTAAGGTCACATAGTGCTCCTAAACAAAGACCTGAACCTAAGAAAAGGCTTTCACTCAATGAAATGATGGCTGCAAGAAACAGCATAAGTGGTGTTAGAATGCAAAGGCCATCCAATTTACAAACACAACAAGAATCTTGGAATTTTTAA 1233 0.3666 MGKASRWLKSLLGKKKEKDHNDNSGSLTPDKKEKKRWSFAKQGKEVMVVESPNITPTSTHDTSWLRSYVSDSENQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTSVRTQRARRSMSKENRFLPEVLARKSLERFDETRSEFHSKRVPTLYETSMNGFDDQSPKIVEIDTYKTRSKSRRFTSTMSECGEDLPHCHGISSPLPCSIPGRVSVPDHCRHVQQDFDWYFNVEECRFPTTAHNTPRFNNSSMRPNNNGLGTPSKSVCGDTFFRSYYSNFPNYMANTQSFKAKLRSHSAPKQRPEPKKRLSLNEMMAARNSISGVRMQRPSNLQTQQESWNF 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03155 410 MobiDBLite consensus disorder prediction 10 36 - -
Car07g03155 410 Pfam Protein of unknown function (DUF4005) 313 391 IPR025064 -
Car07g03155 410 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Car07g03155 410 Gene3D - 63 146 - -
Car07g03155 410 MobiDBLite consensus disorder prediction 1 36 - -
Car07g03155 410 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Car07g03155 410 PANTHER IQ-DOMAIN 5-RELATED 1 401 - -
Car07g03155 410 Pfam IQ calmodulin-binding motif 148 162 IPR000048 GO:0005515
Car07g03155 410 Pfam IQ calmodulin-binding motif 123 142 IPR000048 GO:0005515
Car07g03155 410 PANTHER - 1 401 - -
Car07g03155 410 SMART iq_5 120 142 IPR000048 GO:0005515
Car07g03155 410 SMART iq_5 143 164 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03155 Car-Chr7 58777510 58779954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03155 1 395 IQD Protein Family AT3G16490 54.680 1.21e-108 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03155 - - gmx:100797686 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03155 07 58777510 58779954 Car07g03155 07 58777510 58779954 ECH
Car01g02742 01 52786504 52789263 Car07g03155 07 58777510 58779954 PCT