Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03148 ATGGCGGCACCGGGCGCCGGAATGATGGAAGGAGGAGTACCAACGGCACAACCACCGGGAACCGACATGACCGGTATATGCTTCAGAGATCAATTATGGCTAAACAGTTACCCACTCGATCGTAACCTCGTTTTCGATTACTTCGCTTTATCACCTTTCTACGATTGGACTTCAAACAACGAACAACTCCGAATGCGATCTCTTCACCCTCTCGATCTCTCTCAACTCTCGAAAATGACGGGAACAGAGTATGTGTTGAGTGAAGTTATGGAACCTCACCTTTTCATTATGAGGAAGCAGAAAAGGGATAGTCCTGATAAAGTTACGCCAATGCTTGCTTATTACATTTTGGATGGTTCAATTTATCAAGCTCCACAGTTATCCAATGTTTTTGCTGCTAGAATTGGAAGAGCACTTTATTATATACAAAAGGCTTTTACTACAGCTGCATCTAAGCTGGAGAAGATAGGATATGTTGATTCTGAAAACGATACTACATTGCCGGAACCAAAGGCGGCTAGTAAAGAGACAGTTGACATAAAAGAACTTAAGCGGGTGGATCATATTCTTGCATCCTTGCAACACAAGCTTCCGCCAGCTCCACCTCCACCACCATTTCCAGAAGGGTATGTTCCACCTTCAACAGCAGAAACTGAGAAAGGCCCTGAAACTCAGGAAGCAACTGAGTCGCAAGCACCTTCTGTTGATCCCATAATTGATCAAGGACCTGCAAAAAGAATGAAATTTTGA 750 0.4387 MAAPGAGMMEGGVPTAQPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSLHPLDLSQLSKMTGTEYVLSEVMEPHLFIMRKQKRDSPDKVTPMLAYYILDGSIYQAPQLSNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENDTTLPEPKAASKETVDIKELKRVDHILASLQHKLPPAPPPPPFPEGYVPPSTAETEKGPETQEATESQAPSVDPIIDQGPAKRMKF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03148 249 Pfam MED6 mediator sub complex component 26 151 IPR007018 GO:0003712|GO:0006357|GO:0016592
Car07g03148 249 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 14 249 - -
Car07g03148 249 PANTHER MED-6-RELATED 14 249 IPR007018 GO:0003712|GO:0006357|GO:0016592
Car07g03148 249 Gene3D Mediator complex, subunit Med6 20 149 IPR038566 -
Car07g03148 249 MobiDBLite consensus disorder prediction 196 211 - -
Car07g03148 249 MobiDBLite consensus disorder prediction 193 249 - -
Car07g03148 249 PIRSF MED6_meta/plant 12 249 IPR016820 GO:0003712|GO:0006357|GO:0016592
Car07g03148 249 MobiDBLite consensus disorder prediction 218 235 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Car07g03148 Med6 8.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03148 K15128 - gmx:100792248 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03148 07 58690302 58692633 Car07g03148 07 58690302 58692633 ECH