Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03123 ATGGCTTACTTTGGGAACATAATAGGTGAAATATCATGGATTTGTCTGAAGAATTTTGATTTCAATTCCTTATGTTCACAAAGAAGCTTAATAGACACTATCAATATACTCTTTCTTTGTGTCTACTACACATCTTTGCTTATCACTTTAATCAGAAAAAGTTCTACAAATGAAAGCCAAAGAAAAAACTGGATTTTCCTTATTGTTTCAATATGTTGTGGTGTTATTGGCATTGCACTTTTCAGTATTGGCTTGTGGAATCTCATAGTCAAAAGTGATAACTTTGAGCATTGGAGTAGCATTATCATAGGATTCATTTGGATTTCTTTTGCTATTTCTTTGCTTGTTCAAAGAGTCAAATGGATTAGAATATTAAACAGTATATGGTGGGGATCTTCTTGTGTATTGGTTTCAGCACTCAACATTGAAATTCTGTTAAAAAATCATGCCATTGAAACTTTTGATATCACAATATGGCTTGTACACTTTCTTCTTCTATTCTGTGCCTTCAAAAATCTTGATTATTTAGGAACTCATAGTGTCCAAGAATGTTTGTCTGAACCACTTTTAGCTCAAAAAAATGAAACTAAACAAATAGGATTAGGCCATGCTACATTTCTCAACAAAGTGATTTTCTCTTGGGTTAATTCTTTACTAAGTTTGGGTTACTCAAAGTCACTAGCTCTAGAAGATATCCCTTCCCTTGTTTCTGAAGATAAAGCAGACATGAGTTATCAAAACTTTGTGCATGCATGGGAGTCCCTTGTAAGAGATAGGACAAAGAACAATACAAAGAACTTGGTTCTTTGGTCTATTGTCAGAACTTACTTAAAAGAAAACATATTAATAGCATTTTATGCATTACTAAGAACAATTGCTGTTGTGGTTTCACCTCTAATACTCTATGCTTTTGTTAACTACTCAAATAAAACTGAGGTAGATCTTAATGAAGGTCTTTCCATAGTTGGTTTTTTGATTCTTACAAAGTTGGTTGAGTCTTTCTCCCAAAGACATTGGTTTTTTAACTCAAGAAGGTCAGGAATGAAAATGAGGTCATCTCTAATGGTGGCAGTTTATAAAAAACAGCTAAAGCTTTCAAGTTCAGCAAGGACAAGACACTCGGCCGGCGAGATTGTTAATTACATTGCAGTTGATGCATACAGAATGGGAGAATTTCCATGGTGGTTTCATATAACATGGACTAGTGCACTGCAACTTGTTCTGTCCATTGTTATTCTTTTCGGCATTGTTGGTATTGGTGCTCTTCCTGGTTTAGTCCCTCTTCTTATATGTGGACTTCTCAATGTACCATTTGCAAGGATCCTACAAAATTGTCAGTCACAGTTTATGATCGCGCAGGACGAACGTCTTAGATCAACTTCAGAGATTCTAAATAGTATGAAGATCATTAAGTTACAATCATGGGAAGAAAAATTCAAGAGCTTAGTCGAGTCTTTACGCGATAAAGAGTTCATATGGTTGTCAAAAGCACAGATCATGAAAGCTTTTGGATCATTTCTTTATTGGATGTCTCCTACCGTTGTATCTTCTGTTGTTTTCCTTGGATGTGCTATTTCCAAGAGTGCACCATTGAATGCTGAAACCATTTTCACAGTTCTTGCAACATTGAGAAACATGGGAGAACCTGTTAGAATGATTCCAGAGGCTCTATCCATTATGATTCAAGTTAAGGTTTCCTTTGATCGTCTTAGTAACTTTTTGCTTGATGAAGAACTAAACAATGATGGTAGTGGAAGAAACTTAAAGCAGTGTTTAGTTAATGCTTTGGAAATTCAAGATGGCAACTTCATTTGGGATCATGAATCTGTGTCTCCAACTTTAACAGATGTGAATTTAGAAATCAAATGGAGACAGAAAATTGCAGTTTGTGGACCAGTTGGAGCTGGAAAATCATCTCTTCTGTATGCAATACTTGGAGAGATTCCCAAAATTTCAGGAACTGTTAATGTAGGTGGAACTCTTGCATATGTTTCTCAATCTTCTTGGATACAAAGTGGAACGGTTCGAGATAATATACTCTTTGGAAAGCCAATGGACAAAACAAGATATGAGAAAGCAATTAAAGCTTGTGCCTTAGATAAGGATATTAATGATTTTAGCCATGGTGATCTTACAGAAATTGGTCAGAGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTCGCTCGAGCAGTCTATAATGATGCTGATATTTATCTCCTTGATGATCCTTTCAGTGCAGTTGATGCACATACAGCTGCAATACTATTCAATGAATGTGTGATGACTGCTTTAAGAGAGAAAACAGTCATTCTTGTTACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATATAATATTGGTAATGGAGGGTGGAAAAGTTATTCAATCAGGTAGTTATGAGAATCTCCTAACAGCTGGAACAGCCTTTGAACTACTTGTGAGTGCTCATAAAGACGCAATTAATGAGTTGAATCAAGAAGATGAAAATAAAAGAGGTTCTGAAAATGAGGTTTTTTCTAGAAATCAAAGTGAGGGAGAGATTTCTAGTACCAAGGATCTACTTGGAGCACAACTTACACAAGAGGAAGAAAAAGTGATTGGTAATGTTGGATGGAAGCCATTTTGGGATTATATTAATTATTCCAAAGGGTCATTCATGTTGTGTTTCATCTTATTAGCACAATCTGTTTTTATGGCTTTGCAAACTGCATCAACTTTTTGGCTTGCTATAGCCATTGAAATTCCAAAAGTAACTAGTGCCATTTTGATTGGAGTTTATTCATTAATTGCTTTTGCTAGTGCTGGTTTTGTATATCTAAGGTCTTACTTGACTGCAATTCTTGGATTAAAAGCTTCTATTACTTTCTTCTCAAGCTTCAATACAGCTATTTTCAATGCTCCAATGTTGTTCTTTGATTCAACTCCTGTAGGGAGAATTTTAACCAGAGCTTCATCAGATTTGAGTATCGTGGACTTTGATATTCCTTATTCCATCACCTTTGTAGCATCTATAGCTATTGAAGTTCTGGTTATAATTTGTGTAATAGTTTCAGTCACATGGCAAGTTCTCATTGTTGCTGTTCCTGCAATGGTTGCATCAATATTCATTCAGCAATATTATCAAGCAACTGCAAGGGAACTAATACGGATCAACGGTACCACGAAAGCTCCAGTCATGAATTTTACAGCTGAGACATCACTTGGAGTGGTTACTGTAAGAGCATTCAACATGGTAGACAGATTTTTCAAAAACTACTTAAAACTTGTGGACACAGATGCTTCATTGTTCTTTCATTCTAATGTGGCTATGGAATGGTTAGTTTTAAGGATTGAAGCACTTCAAAATTTGACTGTTATCACTGCAGCTTTATTGCTTGTTCTACTTCCTCAGGGATATGTATCCCCAGGACTTGTGGGGCTGTCCCTTTCTTATGCTTTTACATTGACAGGAGCTCAAATATTTTGGACTAGATGGTTTTCCAACCTATCAAACTATATTATCTCTGTTGAAAGAATTAAACAATTCATTCACATACCAGCTGAGCCTCCAGCCATTGTAGAAAACAACCGACCTCCATCTTCATGGCCTTCCAAGGGAAAGATTGATCTTCAAGGCTTGGAGATTAGATATCGTCTGAATGCTCCATTAGTCCTTAAAGGAATCACTTGTACATTTAAAGAAGGGAGTAGGGTTGGAGTTGTTGGAAGGACAGGAAGTGGAAAAAGCACACTGATCAGTGCTTTGTTTCGCTTAGTTGAGCCTTCAAGAGGTGATATTCTTATTGATGGGATGAACATTTGTTCAATGGGGTTGAAAGATTTGAGAATGAGGCTAAGCATAATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACAAACCTAGACCCTCTAGGCCTCTACTCAGATGATGAAATATGGAAGGCTGTAGAGAAATGTCAGCTAAAGGAAACAATCAACAAGCTACCAAGTCTCTTAGACTCTTCTGTAAGTGATGAAGGTGGAAATTGGAGCTTAGGACAACGCCAATTATTTTGTCTTGGAAGAGTTCTACTAAAAAGAAACAAAATTCTTGTTCTAGATGAAGCTACAGCATCCATTGACTCTGCTACAGATGTCATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGCACAGTTATAACTGTGGCTCATAGAGTTCCAACTGTAATAGACAGTGATATGGTCATGGTCCTATCTTATGGGAAATTGGTGGAATATGATGAGCCTTCAAAACTAATGGACACCAACTCTTCATTCTCTAAGCTTGTAGCTGAATATTGGTCTAGTTGCAGGAAGAATTCCTTCCCAAAGATTGGCATGCAGCAGCAATGA 4374 0.3658 MAYFGNIIGEISWICLKNFDFNSLCSQRSLIDTINILFLCVYYTSLLITLIRKSSTNESQRKNWIFLIVSICCGVIGIALFSIGLWNLIVKSDNFEHWSSIIIGFIWISFAISLLVQRVKWIRILNSIWWGSSCVLVSALNIEILLKNHAIETFDITIWLVHFLLLFCAFKNLDYLGTHSVQECLSEPLLAQKNETKQIGLGHATFLNKVIFSWVNSLLSLGYSKSLALEDIPSLVSEDKADMSYQNFVHAWESLVRDRTKNNTKNLVLWSIVRTYLKENILIAFYALLRTIAVVVSPLILYAFVNYSNKTEVDLNEGLSIVGFLILTKLVESFSQRHWFFNSRRSGMKMRSSLMVAVYKKQLKLSSSARTRHSAGEIVNYIAVDAYRMGEFPWWFHITWTSALQLVLSIVILFGIVGIGALPGLVPLLICGLLNVPFARILQNCQSQFMIAQDERLRSTSEILNSMKIIKLQSWEEKFKSLVESLRDKEFIWLSKAQIMKAFGSFLYWMSPTVVSSVVFLGCAISKSAPLNAETIFTVLATLRNMGEPVRMIPEALSIMIQVKVSFDRLSNFLLDEELNNDGSGRNLKQCLVNALEIQDGNFIWDHESVSPTLTDVNLEIKWRQKIAVCGPVGAGKSSLLYAILGEIPKISGTVNVGGTLAYVSQSSWIQSGTVRDNILFGKPMDKTRYEKAIKACALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNECVMTALREKTVILVTHQVEFLSEVDIILVMEGGKVIQSGSYENLLTAGTAFELLVSAHKDAINELNQEDENKRGSENEVFSRNQSEGEISSTKDLLGAQLTQEEEKVIGNVGWKPFWDYINYSKGSFMLCFILLAQSVFMALQTASTFWLAIAIEIPKVTSAILIGVYSLIAFASAGFVYLRSYLTAILGLKASITFFSSFNTAIFNAPMLFFDSTPVGRILTRASSDLSIVDFDIPYSITFVASIAIEVLVIICVIVSVTWQVLIVAVPAMVASIFIQQYYQATARELIRINGTTKAPVMNFTAETSLGVVTVRAFNMVDRFFKNYLKLVDTDASLFFHSNVAMEWLVLRIEALQNLTVITAALLLVLLPQGYVSPGLVGLSLSYAFTLTGAQIFWTRWFSNLSNYIISVERIKQFIHIPAEPPAIVENNRPPSSWPSKGKIDLQGLEIRYRLNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGMNICSMGLKDLRMRLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETINKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNKILVLDEATASIDSATDVILQRVIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKNSFPKIGMQQQ 1457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03123 1457 MobiDBLite consensus disorder prediction 830 852 - -
Car07g03123 1457 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 62 1451 - -
Car07g03123 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1195 1438 IPR027417 -
Car07g03123 1457 Gene3D - 1188 1439 IPR027417 -
Car07g03123 1457 ProSitePatterns ABC transporters family signature. 721 735 IPR017871 GO:0005524
Car07g03123 1457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 596 819 IPR003439 GO:0005524
Car07g03123 1457 CDD ABC_6TM_ABCC_D2 887 1180 IPR044726 GO:0140359
Car07g03123 1457 SUPERFAMILY ABC transporter transmembrane region 269 570 IPR036640 GO:0005524|GO:0016021
Car07g03123 1457 Coils Coil 820 840 - -
Car07g03123 1457 SUPERFAMILY ABC transporter transmembrane region 876 1187 IPR036640 GO:0005524|GO:0016021
Car07g03123 1457 SMART AAA_5 1231 1423 IPR003593 -
Car07g03123 1457 SMART AAA_5 623 796 IPR003593 -
Car07g03123 1457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1207 1439 IPR003439 GO:0005524
Car07g03123 1457 CDD ABC_6TM_ABCC_D1 282 570 IPR044746 GO:0140359
Car07g03123 1457 CDD ABCC_MRP_domain2 1203 1423 - -
Car07g03123 1457 Gene3D ABC transporter type 1, transmembrane domain 857 1186 IPR036640 GO:0005524|GO:0016021
Car07g03123 1457 Gene3D ABC transporter type 1, transmembrane domain 257 574 IPR036640 GO:0005524|GO:0016021
Car07g03123 1457 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 62 1451 - -
Car07g03123 1457 Pfam ABC transporter transmembrane region 282 542 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g03123 1457 Pfam ABC transporter transmembrane region 903 1155 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g03123 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 816 IPR027417 -
Car07g03123 1457 Gene3D - 575 845 IPR027417 -
Car07g03123 1457 CDD ABCC_MRP_domain1 596 796 - -
Car07g03123 1457 Pfam ABC transporter 1222 1370 IPR003439 GO:0005524
Car07g03123 1457 Pfam ABC transporter 614 748 IPR003439 GO:0005524
Car07g03123 1457 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 281 562 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g03123 1457 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 893 1155 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03123 Car-Chr7 58415060 58421906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03123 581 857 Calmodulin-binding Proteins AT2G36910 25.581 5.15e-21 98.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03123 07 58415060 58421906 Car07g03123 07 58415060 58421906 ECH