Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03120 ATGAGTCGAGAGCAGTCAAAGCGAGGGAAGCAAGAGAAAGGTTGTGATGGTGGTGAGAAGGTTATTGTTGCTGTTAAGGCATCGAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCCTTGACTCATGTTGTTCAGCCTGGAGATTGCATTACATTGCTAGTGGTTGTTCCTTCACAGAGTTCAGGTAGAAGATTATGGGGTTTTCCTAGATTTGCTGGTGACTGTGCCGGTGGTATGAAGAAGTACCCTCCAGGAACAATTTTAGAGCAGAAAAGTGATATCAACGATTCTTGCTCTCAGATGATCCTTCAGCTCCATGATGTCTATGATCCAAATAAGATAAATGTCAGGATTAAAATTGTTGCCGGATCACCTTGTGGAGCAGTGGCTGCAGAAGCCAAGAAAGGACTAGCCAGTTGGGTTGTATTAGACAAACACCTCAAACATGAAGAAAAGAGATGCATGGAAGAGCTGCAGTGTAACATTGTTGTTATGAAGCGTTCTCAACCGAAAGTGCTTCGCTTGAACTTGATCGGACCACAAAAGAAGGATGATGAAGCAGGTACATCACCTTCTAAGCAAGATGGTATGCTTGAAAAGCAAACCAAAAAGAAGATTGATTCTTTAATAGATTCTATCAAAGGACCAAATGTTACTCCAACTAGCAGCCCTGAGCTAGGGACACCATTCACTGCCACTGACGCCGCTACTTCATCGGCTTCAAGCTCTGATCCTGGAACTTCACCATTCTTTGTATCAGAGATGAATGGCGAGTCAAAGAAAGAGGAAACCATTAAGGAAAGTCAAGAACTTTGTGACACTAATTCGGATACCGAAAGTGAAAGCCTGTCCACATCTTCAGCTAGCTTTAGATACCAGCCGTGGATCACTGAATTGCTTTTACATCAACAATCATCTCAACGCAACGAAGAAATATCCGAGACGTATCACGGTATGCCTCAAGCAACTACAACCAAAGCTTTGCTAGAAAAGTTTTCTAGACTTGATAGAGAAGCTGGAATTGAAATGTCGTCAGCATATAGAAACGACACAGATTTCAGCGGTAATTTAAGAGAAGCGATAGCATTTTCAGGAAATGTTCCACCTGGTCCACCTCCACTGTGTTCAATATGTCAACACAAGGCACCTATTTTTGGAAAACCTCCAAGATGGTTCAACTATGCTGAGTTGGAACTCGCTACTGGTGGATTTTCGCAAGCAAACTTCTTGGCAGAAGGAGGGTTTGGCTCTGTTCATAGAGGGGTTCTACCAGAAGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAAGGTGATGTTGAGTTTTGTTCTGAAGTAGAAGTTCTGAGCTGCGCTCAGCACCGAAACGTtgttatgctgattgggttctgtatagaggataagagaaggctactggtttatgagtacatatgcaatggatcATTGGATTCACATTTATATGGGCGACAAAGGAATCCTTTAGAATGGTCTGCTAGGCAAAAAATTGCTGTTGGAGCTGCTCGAGGGCTAAGGTATCTTCATGAAGAGTGCAGAGTAGGTTGTATCATCCACCGTGACATGAGGCCAAACAACATACTCATCACTCATGATTTTGAACCTCTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGACGGAGACATGGGTGTGGATACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGTCAAATCACAGAAAAAGCTGATGTTTATTCTTTTGGAGTGGTATTGGTGGAGCTTGTTACCGGTAGAAAAGCTGTTGATCTCACTAGGCCAAAGGGACAGCAGTGCCTTACTGAGTGGGCAAGACCACTGTTAGAAGACTATGCCATTGATGAACTTATTGACCCTAGGCTGGAAGGTCAATATTTAGAACACGAGGTCTATTGCATGCTACATGCTGCTTCATTATGCATAAGGAGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTCCGAATTCTAGAGGGTGACATGGTGATGGACACAAACTACATTTCAACTCCAAGCTATGATGTTGGAAACAGGAGTGGTCGCATATGGTCAGAGCCACTGCAGCAGAGACAGAACCATTACAGTGGTCCCCTCTTAGAAGATTCATTGCCATTGGAGTCATTTAGTGGAAAGCTATCTCTTGAAAAGTACAAGCCTGCTTCCTATTGGGATAGGTGTAGTAGTAGAGACAAACCAAGGAGGGCCTCATGTGAAGATGATGTTTGA 2277 0.422 MSREQSKRGKQEKGCDGGEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCAGGMKKYPPGTILEQKSDINDSCSQMILQLHDVYDPNKINVRIKIVAGSPCGAVAAEAKKGLASWVVLDKHLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGPQKKDDEAGTSPSKQDGMLEKQTKKKIDSLIDSIKGPNVTPTSSPELGTPFTATDAATSSASSSDPGTSPFFVSEMNGESKKEETIKESQELCDTNSDTESESLSTSSASFRYQPWITELLLHQQSSQRNEEISETYHGMPQATTTKALLEKFSRLDREAGIEMSSAYRNDTDFSGNLREAIAFSGNVPPGPPPLCSICQHKAPIFGKPPRWFNYAELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRNPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDMGVDTRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEDYAIDELIDPRLEGQYLEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMDTNYISTPSYDVGNRSGRIWSEPLQQRQNHYSGPLLEDSLPLESFSGKLSLEKYKPASYWDRCSSRDKPRRASCEDDV 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03120 758 MobiDBLite consensus disorder prediction 178 286 - -
Car07g03120 758 MobiDBLite consensus disorder prediction 256 273 - -
Car07g03120 758 SUPERFAMILY Protein kinase-like (PK-like) 388 689 IPR011009 -
Car07g03120 758 CDD USP_Like 20 146 - -
Car07g03120 758 MobiDBLite consensus disorder prediction 214 254 - -
Car07g03120 758 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 709 - -
Car07g03120 758 Pfam Protein tyrosine and serine/threonine kinase 408 673 IPR001245 GO:0004672|GO:0006468
Car07g03120 758 CDD STKc_IRAK 410 676 - -
Car07g03120 758 ProSiteProfiles Protein kinase domain profile. 404 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03120 758 Gene3D Phosphorylase Kinase; domain 1 376 479 - -
Car07g03120 758 Gene3D Transferase(Phosphotransferase) domain 1 480 686 - -
Car07g03120 758 ProSitePatterns Tyrosine protein kinases specific active-site signature. 525 537 IPR008266 GO:0004672|GO:0006468
Car07g03120 758 PANTHER OS01G0253100 PROTEIN 16 709 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03120 Car-Chr7 58364801 58371715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03120 384 738 Trihelix Transcription Factor Family AT1G70460 46.978 5.88e-101 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Car07g03120 PK_Tyr_Ser-Thr 3.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03120 - - cam:101503019 1504.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03120 07 58364801 58371715 Car07g03120 07 58364801 58371715 ECH
Car01g02721 01 52625207 52630060 Car07g03120 07 58364801 58371715 PCT